HHsearch results for GI: 254780464 and protein with PDBid: 3d3y_A
>3d3y_A Uncharacterized protein; APC29635, conserved protein, structural genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis V583}
Probab=100.00 E-value=0 Score=444.67 Aligned_cols=398 Identities=15% Similarity=0.217 Sum_probs=343.4
Q ss_pred CEEEEECCCCCEEEEECCC-CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC-CHHHHHHHHHHH-CCEEEEE
Q ss_conf 6189987987199998589-987999999833114488889834899998973356888-988999999970-8767997
Q gi|254780464|r 2 NLRISKTSSGITVITEVMP-IDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTKR-TAKEIVEEIEKV-GGDINAY 78 (424)
Q Consensus 2 ~~~~~~L~NGl~v~~~~~~-~~~~~i~~~~~~Gs~~e~~~~~G~ah~lehl~~~gt~~~-~~~~~~~~l~~~-G~~~na~ 78 (424)
|....+|+||++|++.|++ .+++.|.+.|++|+..|+ .|.+++++||+|+||+++ +..++.+.++.+ |+.+|++
T Consensus 2 ~~~~~~L~NGl~v~~~p~~~~~~~~i~~~~~~~~~~e~---~~~~~ll~~ll~~gt~~~~~~~~l~~~l~~l~G~~~~~~ 78 (425)
T 3d3y_A 2 NAMSVQLVKGVNLHVIPTEKYKTVRLLVRFNTRLNHET---ITKRTLLSSLMETNSLNYPNQVKLSERLAELYGASFGIG 78 (425)
T ss_dssp CCEEEEEETTEEEEEEECSSCSEEEEEEEEEEECCTTT---HHHHHHHHHHHHHCCSSSCSHHHHHHHHHHTTSCEEEEE
T ss_pred CCEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCC---CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEE
T ss_conf 84599918994899997798856999999948988542---079999999997023579999999999998639747888
Q ss_pred ECCC----EEEEEEECCCCC-------CCCCHHHHHHHHHCC-----CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf 5322----379996126656-------521001222322103-----566200112455676666511332111000000
Q gi|254780464|r 79 TSLE----HTSYHAWVLKEH-------VPLALEIIGDMLSNS-----SFNPSDIERERNVVLEEIGMSEDDSWDFLDARF 142 (424)
Q Consensus 79 t~~d----~~~~~~~~~~~~-------~~~~l~ll~~~~~~p-----~~~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~ 142 (424)
|+.+ .++|++++++++ ++.+|+++.+++.+| .|++++|++||+++++|+++..++|...+.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~d~l~~p~~~~~~f~~~~~e~ek~~i~~el~~~~~~p~~~~~~~l 158 (425)
T 3d3y_A 79 VSKKGNQHWFNISMNIVNDHYLQDSQVLAEAVDFLKEIIFAPNIQAGQFEAETFQREKENLKAYLESIVEDKQTYASLAL 158 (425)
T ss_dssp EEEETTEEEEEEEEEEECGGGCSSCCHHHHHHHHHHHHHHSCSEETTEECHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred EECCCCEEEEEEEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 60367517999998861522124557699999999999868676534689999999999999999987459999999999
Q ss_pred CCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC--CC
Q ss_conf 122222-222222222103442000166776420112456630000025455122112211012358777788664--22
Q gi|254780464|r 143 SEMVWK-DQIIGRPILGKPETISSFTPEKIISFVSRNYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVAKIKESM--KP 219 (424)
Q Consensus 143 ~~~~f~-~~~~~~~~~g~~~~i~~lt~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~--~p 219 (424)
.+.+|+ ++|+++|++|+.++|+++++++|++||++||+|+||+|+|+||+++++++++++++|+.++........ .|
T Consensus 159 ~~~~~~~~~~~~~~~~G~~e~i~~it~e~l~~fy~~~y~p~n~~l~v~Gd~d~~~v~~~~~~~~~~~~~~~~~~~~~~~p 238 (425)
T 3d3y_A 159 QSVYFNQSEDQKIPSFGTVAALAEETAASLAAYYQKMLAEDQVDIFVLGDVNEAELVPLFKQLPFTPREEGKAAIFYNQP 238 (425)
T ss_dssp HHHHTTTCTTTTSCTTCCHHHHHHCCHHHHHHHHHHHHHHSEEEEEEEESCCHHHHHHHHHTSCCCCCCCCCCCSCCCCC
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99847899988789988999986389999999876234777569999527999999999998408875457877666677
Q ss_pred CCCCCEEEEECCCCCCCEEEECCCCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 33221023303684321023010000-13521135689987776248765322220002686210133322210122013
Q gi|254780464|r 220 AVYVGGEYIQKRDLAEEHMMLGFNGC-AYQSRDFYLTNILASILGDGMSSRLFQEVREKRGLCYSISAHHENFSDNGVLY 298 (424)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~d~~al~ll~~iLg~g~sSrL~~~lRe~~glaY~v~s~~~~~~~~g~~~ 298 (424)
............+.+++++.++|+.+ .+.+++++++.+++.+||++++|||+++||+++|++|++++.+..+ .|.|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~vl~~iL~~~~~s~L~~~lRe~~gl~y~v~s~~~~~--~g~~~ 316 (425)
T 3d3y_A 239 IRNVIEERTEREVLAQSKLNLAYNTDIYYGDSYYFALQVFNGIFGGFPHSKLFMNVREKEHLAYYASSSIDTF--RGFMT 316 (425)
T ss_dssp CCSSCEEEEEEEECSSEEEEEEEECCCCTTSTTHHHHHHHHHHHTTSTTSHHHHHTTTTSCCCSEEEEEEETT--TTEEE
T ss_pred CCCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEEEEECC--CCCEE
T ss_conf 6567642564267776479998517987787789999999985079725689999988458158862100037--88559
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 44425830247778778999985314-89989999999999999985138989999999999996898479899999887
Q gi|254780464|r 299 IASATAKENIMALTSSIVEVVQSLLE-NIEQREIDKECAKIHAKLIKSQERSYLRALEISKQVMFCGSILCSEKIIDTIS 377 (424)
Q Consensus 299 i~~~~~~~~~~~~~~~i~~~i~~l~~-~i~~~el~~ak~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~i~ 377 (424)
+++.|++++..++++.+.++++.+.+ +++++||+++|+.++.++....+++..++..++.+.+.++++.+.+++.+.|+
T Consensus 317 i~~~~~~~~~~~~~~~i~~~l~~l~~~~is~~el~~aK~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 396 (425)
T 3d3y_A 317 VQTGIDGKNRNQVLRLISTELENIRLGKIRELEIEQTKAMLKNQYILALDNAGAWLEKEYLNELMPQTMLTAEEWIARIN 396 (425)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHSTTSCCCHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 99733644499999999999999997799999999999999988988258999999999999973899888999999997
Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 2798999999998627787799981660
Q gi|254780464|r 378 AITCEDIVGVAKKIFSSTPTLAILGPPM 405 (424)
Q Consensus 378 ~vt~~di~~~~~~~l~~~~~i~~vgp~~ 405 (424)
+||++||+++++++.. +...++.|.+.
T Consensus 397 ~vT~edv~~~ak~l~~-~~~y~l~g~~~ 423 (425)
T 3d3y_A 397 AVTIPEIQEVAKRLEL-QAIFFLEGETE 423 (425)
T ss_dssp HCCHHHHHHHHHHCEE-EEEEEEEEECC
T ss_pred CCCHHHHHHHHHHCCC-CCEEEEECCCC
T ss_conf 8899999999971531-47899958989