HHsearch results for GI: 254780464 and protein with PDBid: 3hdi_A
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=100.00 E-value=0 Score=535.55 Aligned_cols=406 Identities=32% Similarity=0.566 Sum_probs=381.8
Q ss_pred EEEEECCCCCEEEEECCC-CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECC
Q ss_conf 189987987199998589-9879999998331144888898348999989733568889889999999708767997532
Q gi|254780464|r 3 LRISKTSSGITVITEVMP-IDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTKRTAKEIVEEIEKVGGDINAYTSL 81 (424)
Q Consensus 3 ~~~~~L~NGl~v~~~~~~-~~~~~i~~~~~~Gs~~e~~~~~G~ah~lehl~~~gt~~~~~~~~~~~l~~~G~~~na~t~~ 81 (424)
|+.+||+||++|++.+++ .|.++|+++|++||++||+++.|+||++|||+|+||++++..+|.+.++.+|+.+|++|++
T Consensus 2 i~~~tL~NGl~v~~~~~~~~~~v~i~~~~~~Gs~~e~~~~~G~ahllehl~~~gt~~~~~~~l~~~l~~~G~~~~~~t~~ 81 (421)
T 3hdi_A 2 INTMTLDNGVRIITEKMSTVRSVSIGIWVGTGSRYESAEENGISHFLEHMFFKGTNTRSAQEIAEFFDSIGGQVNAFTSK 81 (421)
T ss_dssp CEEEECTTSCEEEEEECTTCSEEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSBBSSSBHHHHHHHHHTTTSCEEEEECS
T ss_pred CEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECC
T ss_conf 51899499989999998999889999997514777799973499999999708999999899999999729989999868
Q ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 23799961266565210012223221035662001124556766665113321110000001222222222222221034
Q gi|254780464|r 82 EHTSYHAWVLKEHVPLALEIIGDMLSNSSFNPSDIERERNVVLEEIGMSEDDSWDFLDARFSEMVWKDQIIGRPILGKPE 161 (424)
Q Consensus 82 d~~~~~~~~~~~~~~~~l~ll~~~~~~p~~~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~f~~~~~~~~~~g~~~ 161 (424)
|+++|++++++++++.+|+++++++.+|.|+++.++++|+.++++++...++|...+.+.+...+|+++|++++.+|+.+
T Consensus 82 ~~~~~~~~~~~~~l~~~l~ll~~~~~~p~~~~~~~~~ek~~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 161 (421)
T 3hdi_A 82 EYTCYYAKVLDDHAGQAIDTLSDMFFHSTFQKEELEKERKVVFEEIKMVDDTPDDIVHDLLSSATYGKHSLGYPILGTVE 161 (421)
T ss_dssp SCEEEEEEEEGGGHHHHHHHHHHHHHSBCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTSGGGSCTTCCHH
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 84899996136678878999998653765335567999999999999886687889999998733799999888778731
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEC
Q ss_conf 42000166776420112456630000025455122112211012358777788664223322102330368432102301
Q gi|254780464|r 162 TISSFTPEKIISFVSRNYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVAKIKESMKPAVYVGGEYIQKRDLAEEHMMLG 241 (424)
Q Consensus 162 ~i~~lt~~~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~i~~~ 241 (424)
.++.++.+++++||++||+|+||+++|+||++++.+ +.+.++|+.|++...+.....+...+.+.+..++.+|+++.++
T Consensus 162 ~~~~~~~~~l~~f~~~~y~~~~~~l~i~Gd~~~~~v-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~i~~~ 240 (421)
T 3hdi_A 162 TLNSFNEGMLRHYMDRFYTGDYVVISVAGNVHDELI-DKIKETFSQVKPTTYNYQGEKPMFLPNRIVRKKETEQAHLCLG 240 (421)
T ss_dssp HHHHCCHHHHHHHHHHHSSTTTEEEEEEESCCHHHH-HHHHHHTTSSCCCCCCCCCCCCCCCCCEEEEECCCSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE
T ss_conf 014133456899999844843121566174477788-9999985038988778777887678975897689875699999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 00001352113568998777624876532222000268621013332221012201344425830247778778999985
Q gi|254780464|r 242 FNGCAYQSRDFYLTNILASILGDGMSSRLFQEVREKRGLCYSISAHHENFSDNGVLYIASATAKENIMALTSSIVEVVQS 321 (424)
Q Consensus 242 ~~~~~~~~~d~~al~ll~~iLg~g~sSrL~~~lRe~~glaY~v~s~~~~~~~~g~~~i~~~~~~~~~~~~~~~i~~~i~~ 321 (424)
|++++..++|+++++|++.+||++++|||+++||+++|++|+++++...+.+.|.+++++.|.+++..++++.+.++|+.
T Consensus 241 ~~~~~~~~~d~~al~vl~~iLg~~~~s~L~~~lRe~~gl~y~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~l~~ 320 (421)
T 3hdi_A 241 YPGLPIGDKDVYALVLLNNVLGGSMSSRLFQDIREKRGLCYSVFSYHSSFRDSGMLTIYAGTGHDQLDDLVYSIQETTSA 320 (421)
T ss_dssp EECCCTTCTTHHHHHHHHHHHTSSSSSHHHHHHTTTTCCCSCEEEEEEECSSCEEEEEEEEEEGGGHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 84599998169999999998668844589999997328813665321432367741676226862147789999999999
Q ss_pred HCC-CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 314-8998999999999999998513898999999999999689847989999988727989999999986277877999
Q gi|254780464|r 322 LLE-NIEQREIDKECAKIHAKLIKSQERSYLRALEISKQVMFCGSILCSEKIIDTISAITCEDIVGVAKKIFSSTPTLAI 400 (424)
Q Consensus 322 l~~-~i~~~el~~ak~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~i~~vt~~di~~~~~~~l~~~~~i~~ 400 (424)
+++ +++++||+++|+.++.++....+++..++..++.+.++++++.+++++.+.|++||++||++++++||++++++++
T Consensus 321 l~~~~~t~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~edv~~~a~~~l~~~~~v~~ 400 (421)
T 3hdi_A 321 LAEKGLTEKELENGKEQLKGSLMLSLESTNSRMSRNGKNELLLKKHRSLDEMIEQINAVQKQDVSRLAKILLSASPSISL 400 (421)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHCCHHHHHHHHHHHTTSCCEEEE
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 98679999999999999999999966799999999999999679966799999999778999999999997699988999
Q ss_pred EECCCCCCCC
Q ss_conf 8166010899
Q gi|254780464|r 401 LGPPMDHVPT 410 (424)
Q Consensus 401 vgp~~~~~P~ 410 (424)
+||+.+ +|.
T Consensus 401 v~~~~~-~~~ 409 (421)
T 3hdi_A 401 INANGE-LPK 409 (421)
T ss_dssp EESSCS-CCS
T ss_pred EECHHH-CCH
T ss_conf 935485-876