HHsearch results for GI: 254780464 and protein with PDBid: 3hdi_A
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=98.31 E-value=9.9e-05 Score=49.27 Aligned_cols=163 Identities=7% Similarity=0.080 Sum_probs=92.6
Q ss_pred CCCCCEEEECCCCCCCCCC-HHH-HHHHHHHHHHCCCCCCCCCC---CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 8432102301000013521-135-68998777624876532222---000268621013332221012201344425830
Q gi|254780464|r 232 DLAEEHMMLGFNGCAYQSR-DFY-LTNILASILGDGMSSRLFQE---VREKRGLCYSISAHHENFSDNGVLYIASATAKE 306 (424)
Q Consensus 232 ~~~~~~i~~~~~~~~~~~~-d~~-al~ll~~iLg~g~sSrL~~~---lRe~~glaY~v~s~~~~~~~~g~~~i~~~~~~~ 306 (424)
+.+...+.+.+.+.+..++ +.. ...++.+++..|...+=..+ ..+..|..+++... ...+.++..+.++
T Consensus 20 ~~~~v~i~~~~~~Gs~~e~~~~~G~ahllehl~~~gt~~~~~~~l~~~l~~~G~~~~~~t~------~~~~~~~~~~~~~ 93 (421)
T 3hdi_A 20 TVRSVSIGIWVGTGSRYESAEENGISHFLEHMFFKGTNTRSAQEIAEFFDSIGGQVNAFTS------KEYTCYYAKVLDD 93 (421)
T ss_dssp TCSEEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSBBSSSBHHHHHHHHHTTTSCEEEEEC------SSCEEEEEEEEGG
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEC------CCEEEEEEECCHH
T ss_conf 9988999999751477779997349999999970899999989999999972998999986------8848999961366
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHCCCHHHH
Q ss_conf 2477787789999853148998999999999999998513898999999999999689847--98999998872798999
Q gi|254780464|r 307 NIMALTSSIVEVVQSLLENIEQREIDKECAKIHAKLIKSQERSYLRALEISKQVMFCGSIL--CSEKIIDTISAITCEDI 384 (424)
Q Consensus 307 ~~~~~~~~i~~~i~~l~~~i~~~el~~ak~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~--~~~~~~~~i~~vt~~di 384 (424)
+.+.+++.+.+.+... .++++++++.|..+...+....+++..++.......++++.+. ...--.+.++++|.+++
T Consensus 94 ~l~~~l~ll~~~~~~p--~~~~~~~~~ek~~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l 171 (421)
T 3hdi_A 94 HAGQAIDTLSDMFFHS--TFQKEELEKERKVVFEEIKMVDDTPDDIVHDLLSSATYGKHSLGYPILGTVETLNSFNEGML 171 (421)
T ss_dssp GHHHHHHHHHHHHHSB--CCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTSGGGSCTTCCHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 7887899999865376--53355679999999999998866878899999987337999998887787310141334568
Q ss_pred HHHHHHHCCCCCEE-EEEE
Q ss_conf 99999862778779-9981
Q gi|254780464|r 385 VGVAKKIFSSTPTL-AILG 402 (424)
Q Consensus 385 ~~~~~~~l~~~~~i-~~vg 402 (424)
+++.++++.++..+ +++|
T Consensus 172 ~~f~~~~y~~~~~~l~i~G 190 (421)
T 3hdi_A 172 RHYMDRFYTGDYVVISVAG 190 (421)
T ss_dssp HHHHHHHSSTTTEEEEEEE
T ss_pred HHHHHHHCCCCCCEEEECC
T ss_conf 9999984484312156617