PSIBLAST alignment of GI: 254780464 and protein with PDB id: 3amj
>gi|322812368|pdb|3AMJ|B Chain B, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 424
>gi|322812370|pdb|3AMJ|D Chain D, The Crystal Structure Of The Heterodimer Of M16b Peptidase From Sphingomonas Sp. A1 Length = 424
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 58/414 (14%), Positives = 124/414 (29%), Gaps = 8/414 (1%)
Query: 3 LRISKTSSGITVI-TEVMPIDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTK--- 58
+ SG V E + V+V+ AGS E ++ G+A ++ GT
Sbjct: 4 IEHWTAPSGAQVYYVENRTLPMLDVQVDFDAGSAREPADQVGVASMTASLMDAGTGSGKS 63
Query: 59 -RTAKEIVEEIEKVGGDINAYTSLEHTSYHAWVLKEHVPLALEIIGDMLSNSSFNPSDIE 117
I + + +G + + S+ VL + +
Sbjct: 64 ALDENAIADRLADIGARLGGGAEADRASFSLRVLSSPAERNSALTILRDILAHPTFPAPV 123
Query: 118 RERNVVLEEIGMSEDDSWDFLDARFSEMVWKDQIIGRPILGKPETISSFTPEKIISFVSR 177
ER G+ E + + T+ + ++++SF
Sbjct: 124 LERERARAIAGLREAQTQPGSILGRRFTELAYGKHPYGHVSSVATLQKISRDQLVSFHRT 183
Query: 178 NYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVA-KIKESMKPAVYVGGEYIQKRDLAEE 236
+Y A V VG + + + + PA+ +
Sbjct: 184 HYVARTAVVTLVGDITRAEAETIAQQLTADLPAGATLPPLPDPAMPRATVERIANPATQA 243
Query: 237 HMMLGFNGCAYQSRDFYLTNILAS-ILGDGMSSRLFQEVREKRGLCYSISAHHENFSDNG 295
H+ +G DF+ + + G G SRL +E+R+KRGL Y ++ G
Sbjct: 244 HIAIGMPTLKRGDPDFFPLVVGNYALGGGGFESRLMKEIRDKRGLSYGAYSYFSPQKSMG 303
Query: 296 VLYIASATAKENIMALTSSIVEVVQSLLE-NIEQREIDKECAKIHAKLIKSQERSYLRAL 354
+ I T E + + + L E+ + + +
Sbjct: 304 LFQIGFETRAEKADEAVQVANDTLDAFLREGPTDAELQAAKDNLINGFALRLDSNAKILG 363
Query: 355 EISKQVMFCGSILCSEKIIDTISAITCEDIVGVAKKIFSSTPTLAILGPPMDHV 408
+++ + + + + + A+T E + + + ++ +
Sbjct: 364 QVAVIGYYGLPLDYLDHYTERVQAVTVEQVREAFARHVKRENLITVVVGGKASL 417