RPSBLAST alignment of GI: 254780464 and protein with PDBid: 1q2l

 Score =  240 bits (612), Expect = 5e-64
 Identities = 77/424 (18%), Positives = 156/424 (36%), Gaps = 17/424 (4%)

Query: 4   RISKTSSGITVITEVMP-IDSAFVKVNIRAGSRNERQEEHGMAHFLEHMLFKGTTKR-TA 61
           +  +  +G+ V+    P    +   + +  GS  + +   G+AH+LEHM   G+ K   A
Sbjct: 22  QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQA 81

Query: 62  KEIVEEIEKVGGDINAYTSLEHTSYHAWVLKEHVPLALEIIGDMLSNSSFNPSDIERERN 121
             + E ++  GG  NA T+   T+++  V  + +P A++ + D ++    +    ERERN
Sbjct: 82  DSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERN 141

Query: 122 VVLEEIGMSEDDSWDFLDARFSEMVWKDQIIGRPILGKPETISS----FTPEKIISFVSR 177
            V  E+ M+       +    +E +       +   G  ET+S        + +  F  +
Sbjct: 142 AVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEK 201

Query: 178 NYTADRMYVVCVGAVDHEFCVSQVESYFNVCSVAKIKESMKPAVYV-----GGEYIQKRD 232
            Y+A+ M  V                 F      + K+       V     G        
Sbjct: 202 YYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPA 261

Query: 233 LAEEHMMLGFNGCAYQSRDFYLTNILASILGDGMSSRLFQEVREKRGLCYSISAHHENFS 292
           L  + + + F      ++    T+ L + L    S     +  +K+GL   ISA+ +   
Sbjct: 262 LPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIV 321

Query: 293 -DNGVLYIASATAKENIMALTSSIVEVVQSLLENIEQREIDKECAKIHAKLIKSQERSYL 351
             N  +   SA+  +  +A    +V  + S L  + ++ IDK+     A ++    R   
Sbjct: 322 NGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPS 381

Query: 352 RALEISKQVMFCGSIL--CSEKIIDTISAITC---EDIVGVAKKIFSSTPTLAILGPPMD 406
              ++        +++    E  +D ++       + +      +      +  + P   
Sbjct: 382 ITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEP 441

Query: 407 HVPT 410
           H  T
Sbjct: 442 HNKT 445