HHsearch alignment for GI: 254780465 and conserved domain: PRK11761
>PRK11761 cysM cysteine synthase B; Provisional.
Probab=99.56 E-value=2.5e-12 Score=105.81 Aligned_cols=263 Identities=16% Similarity=0.193 Sum_probs=163.5
Q ss_pred CEEEECC-------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 6047724-------882546621389812068238889999999973179--8207997166540467999861667855
Q gi|254780465|r 89 TPLIQLN-------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERD--HYITIVGATSGDTGAAAIKAFAGKKRIN 159 (469)
Q Consensus 89 ~pl~~l~-------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~--~~~~il~ATSGDTGsAa~~a~~~~~~i~ 159 (469)
T Consensus 13 TPLi~l~~l~~~~g~~i~~K~E~~nptGS~KdR~A~~---~i~~a~~~G~l~~g~~vveaSSGN~g~alA~~a~-~~G~~ 88 (296)
T PRK11761 13 TPLVKLQRLPPDTGNEILAKLEGNNPAGSVKDRPALS---MIVQAEKRGEIKPGDTLIEATSGNTGIALAMAAA-IKGYR 88 (296)
T ss_pred CCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH-HCCCE
T ss_conf 9848887677443988999862579745829999999---9999997499899987999378867999999999-81974
Q ss_pred EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCC-CCCCCCHHHCCCCHHHHHHHH
Q ss_conf 9997357767603321311344787089971796588899999975015431358311-345565444011055899999
Q gi|254780465|r 160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLS-GINSINWARIMAQIVYYFVSS 238 (469)
Q Consensus 160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~-s~NSIN~~Ril~Q~vyYf~a~ 238 (469)
T Consensus 89 ~~iv~p~~-~s~~k~~~l~~~-GAeVi~~~~~~~~~~ar~~a~~l~~~~~~---~~~~Q~~N~~N~------~ah~~ttg 157 (296)
T PRK11761 89 MKLIMPEN-MSQERRAAMRAY-GAELILVPKEQGMEGARDLALQMQAEGKG---KVLDQFNNPDNP------YAHYETTG 157 (296)
T ss_pred EEEECCCC-CCHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHCCCC---EECCCCCCHHHH------HHHCCCHH
T ss_conf 79967865-788999999974-99557417774568999999999873497---843677885667------77546739
Q ss_pred HHHCCC--CCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCC-CCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHH
Q ss_conf 874477--8873899634657887886677-7508987705872367-63356775322201023455656420013401
Q gi|254780465|r 239 IALGSP--NRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNE-NDTLVRMFDMGMYRPEIVMETTSPAMDIQIPS 314 (469)
Q Consensus 239 ~~~~~~--~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~-NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~S 314 (469)
T Consensus 158 ~EI~~q~~g~id~~V~~vGtGGti~Gia~~lK~~~p~v-kvvgveP~~gs~i~-----Gi-------~~~~~~---~~p~ 221 (296)
T PRK11761 158 PEIWRQTEGRITHFVSSMGTTGTIMGVSRYLKEQNPAV-QIVGLQPEEGSSIP-----GI-------RRWPEE---YLPK 221 (296)
T ss_pred HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCC-----CC-------CCCCCC---CCCC
T ss_conf 99999748983399984277088999999999758999-89998128677576-----86-------656534---3775
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHH
Q ss_conf 37889998709708999999875202651055202211000121342138899999999999863959838339999999
Q gi|254780465|r 315 NFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAA 394 (469)
Q Consensus 315 NfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa 394 (469)
T Consensus 222 ~~~~---------------------------------~~v---D~~~~V~d~ea~~~~r~La~~eGi~vG~Ssga~laaa 265 (296)
T PRK11761 222 IFDA---------------------------------SRV---DRVLDISQAEAENTMRRLAREEGIFCGVSSGGAVAAA 265 (296)
T ss_pred CCCC---------------------------------CCC---CEEEECCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHH
T ss_conf 3565---------------------------------558---7899848899999999999984908717899999999
Q ss_pred HHHHH-CCCCCEEEEECCCCCCCHH
Q ss_conf 99874-7998399997188434988
Q gi|254780465|r 395 LACRK-SSSTPMVTLATAHPSKFPD 418 (469)
Q Consensus 395 ~~~~~-~~~~p~VvLATAHPaKFpe 418 (469)
T Consensus 266 ~~~a~~~~~~~vV~i~~D~G~rYls 290 (296)
T PRK11761 266 LRVAREVPNAVIVAIICDRGDRYLS 290 (296)
T ss_pred HHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 9999888989799998899822278