HHsearch alignment for GI: 254780465 and conserved domain: PRK13028
>PRK13028 tryptophan synthase subunit beta; Provisional.
Probab=99.29 E-value=1.5e-08 Score=79.64 Aligned_cols=336 Identities=14% Similarity=0.078 Sum_probs=185.8
Q ss_pred CCCCCCCCCCCCCCCCHHHHH-----HHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE-----
Q ss_conf 787863286107888988998-----7709998999999998751578998999999999863047667860477-----
Q gi|254780465|r 24 ATDGGLYIPKYIPRLSEKEIK-----DLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQ----- 93 (469)
Q Consensus 24 a~DGGL~vP~~~p~~~~~~~~-----~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~----- 93 (469)
T Consensus 16 g~fGG~~vpe~l~~-~l~el~~~~~~~~~d~~F~~e~~~~~~~y~GR----------------------PTPL~~A~~Ls 72 (403)
T PRK13028 16 GEYGGQFVPPELKP-ALDEIEAAYEEIKKDPDFINELRYLLKHYVGR----------------------PTPLYHAKRLS 72 (403)
T ss_pred CCCCCEECCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC----------------------CCHHHHHHHHH
T ss_conf 88389858598999-99999999999966999999999999864899----------------------86657777778
Q ss_pred --CC-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf --24-882546621389812068238889999999973179820799716654046799986166785599973577676
Q gi|254780465|r 94 --LN-ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRIS 170 (469)
Q Consensus 94 --l~-~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS 170 (469)
T Consensus 73 ~~lgga~IylKrEdln~tGSHKiNnai~Qa----llAk~~Gk~riiaETGAGQhG~A~A~aaA-~~Gl~c~VyMg~~d~~ 147 (403)
T PRK13028 73 EKLGGAQIYLKREDLNHTGAHKINHCLGEA----LLAKRMGKKKVIAETGAGQHGVALATAAA-LFGMECEIYMGEVDIE 147 (403)
T ss_pred HHCCCCEEEEEECCCCCCCCCCHHHHHHHH----HHHHHCCCCEEEEECCCCHHHHHHHHHHH-HCCCCEEEEECCCCCC
T ss_conf 656986799985057877775233089999----99998399758740375256999999999-7699459985443200
Q ss_pred HHH--HCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHH---CCCCCCCCCCCCHHHCC---CCHHHHHHHHHHHC
Q ss_conf 033--21311344787089971796588899999975015431---35831134556544401---10558999998744
Q gi|254780465|r 171 VVQ--QKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFC---HSVNLSGINSINWARIM---AQIVYYFVSSIALG 242 (469)
Q Consensus 171 ~~Q--~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~---~~~~l~s~NSIN~~Ril---~Q~vyYf~a~~~~~ 242 (469)
T Consensus 148 rq~~nv~~M~ll-GA~--Vi~v~~G~~tLkdAi~eAir~~~~~~~~t~Y~lGSvvgphPyp~~V~~fQsvIG~E~~~Q~~ 224 (403)
T PRK13028 148 KQHPNVFRMKIL-GAK--VVPVTRGTRTLKEAVDSAFEAYLKDPDTTHYAIGSVVGPHPFPKMVRDFQSVIGREAREQFL 224 (403)
T ss_pred HHHHHHHHHHHC-CCE--EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 037789999986-998--99806876509999999999998384652697146568872089999999999899999999
Q ss_pred -CCCC-CEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCC----------------------
Q ss_conf -7788-7389963465788788667775089877058723676335677532220102----------------------
Q gi|254780465|r 243 -SPNR-NISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPE---------------------- 298 (469)
Q Consensus 243 -~~~~-~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~---------------------- 298 (469)
T Consensus 225 e~~G~~PD~vvacVGGGSNa~G~f~pFl~d~~v-~ligvEaag----~g~~~g~~aA~l~~G~~gvlhG~~t~~lqd~~G 299 (403)
T PRK13028 225 EMTGRLPDYVVACVGGGSNAIGAFAAFLDDEDV-KLVGVEPAG----RGLDTGEHAATLTLGKPGVLHGFKSYVLQDEDG 299 (403)
T ss_pred HHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC-EEEEECCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 864999998997788723488987764266662-089962677----677776543012589845445720001578898
Q ss_pred CCC--CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 345--565642001340137889998709708999999875202651055202211000121342138899999999999
Q gi|254780465|r 299 IVM--ETTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVL 376 (469)
Q Consensus 299 ~~~--~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y 376 (469)
T Consensus 300 q~~~~hSisaGLdYp--------------gvgPe~s~L~----~~g--------------r~~~~avtD~Eal~A~~~la 347 (403)
T PRK13028 300 EPAPVHSIASGLDYP--------------GVGPEHAYLK----DSG--------------RVEYVSATDEEALDAFFTLS 347 (403)
T ss_pred CCCCCEEECCCCCCC--------------CCCHHHHHHH----HCC--------------CEEEEECCHHHHHHHHHHHH
T ss_conf 837642102234678--------------8588999998----579--------------64999669899999999999
Q ss_pred HHCCCEECCCHHHHHHHHHHHHH--CCCCCEEEEECCCCCCCHHHHHHHHCCC
Q ss_conf 86395983833999999999874--7998399997188434988899980879
Q gi|254780465|r 377 EKSNYLVDPHTAVGIHAALACRK--SSSTPMVTLATAHPSKFPDTVKAASGIV 427 (469)
Q Consensus 377 ~~~gyiiDPHTAvG~~aa~~~~~--~~~~p~VvLATAHPaKFpe~V~~Aig~~ 427 (469)
T Consensus 348 r~EGIiPA~ESaHAia~aik~A~~~~~~~~Iv~nlSGrG~kD~~~~~~~lg~~ 400 (403)
T PRK13028 348 RVEGIIPALESSHAVAYAMKLAPELPKDQIILVNLSGRGDKDIDYVAELLGLG 400 (403)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCC
T ss_conf 81797026556899999999877649998899981688511899999985898