HHsearch alignment for GI: 254780465 and conserved domain: cd01560
>cd01560 Thr-synth_2 Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.
Probab=100.00 E-value=0 Score=1294.15 Aligned_cols=456 Identities=48% Similarity=0.800 Sum_probs=447.5
Q ss_pred CEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 32617898888888999861567878632861078889889987709998999999998751578998999999999863
Q gi|254780465|r 2 KYISTRNVDLSLGFCDTILSGLATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYH 81 (469)
Q Consensus 2 ~y~STRg~~~~~~f~~a~~~Gla~DGGL~vP~~~p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~ 81 (469)
T Consensus 1 ky~STRg~~~~~sF~eall~Gla~DGGLyvP~~~P~l~~~~l~~~~~~sy~ela~~il~~f~~~~i~~~~L~~ii~~ay~ 80 (460)
T cd01560 1 KYVSTRGGNPGVSFSEALLSGLAPDGGLYVPEELPKLSAEEIASWSGLSYQELAFEVLSLFIGDEIPEDDLKSLIDRAYS 80 (460)
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 97518995899798999973778999416787479899999997758899999999999970577999999999999724
Q ss_pred HCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEE
Q ss_conf 04766786047724882546621389812068238889999999973179820799716654046799986166785599
Q gi|254780465|r 82 CFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMY 161 (469)
Q Consensus 82 ~f~~~~~~pl~~l~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~ 161 (469)
T Consensus 81 ~f~~~~~~pl~~l~~~~~vLELFHGPTlAFKD~a~q~l~~l~~~~l~~~~~~~~Il~ATSGDTGsAai~af~~~~~i~v~ 160 (460)
T cd01560 81 FFRHPDIAPLVQLGDNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDVV 160 (460)
T ss_pred CCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 56777666338814984788732288414455689999999999974066347998578884189999999747883499
Q ss_pred EECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
Q ss_conf 97357767603321311344787089971796588899999975015431358311345565444011055899999874
Q gi|254780465|r 162 ILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIAL 241 (469)
Q Consensus 162 vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~ 241 (469)
T Consensus 161 iLyP~g~vS~iQ~~QMtT~~~~NV~~iav~G~FDDcQ~~VK~~f~D~~~~~~~~l~s~NSINw~Rll~QivYYf~ay~~l 240 (460)
T cd01560 161 VLYPKGGVSPIQELQMTTLPADNVHVVAVEGDFDDCQSLVKALFADEDFNKKLKLSSANSINWARILAQIVYYFYAYLQL 240 (460)
T ss_pred EECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 94488889988999862547897799996488088899999996078664367254115400355667899999999997
Q ss_pred CCC--CCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCHHCC-CCCCCCCCCCCCCCHHHHHH
Q ss_conf 477--887389963465788788667775089877058723676335677532220102-34556564200134013788
Q gi|254780465|r 242 GSP--NRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPE-IVMETTSPAMDIQIPSNFER 318 (469)
Q Consensus 242 ~~~--~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~-~~~~T~SpsMDI~v~SNfER 318 (469)
T Consensus 241 ~~~~~~~~v~f~VPTGNFGni~Ag~~Ak~MGLPI~~li~AtN~Ndil~r~~~tG~y~~~~~v~~T~SpsMDI~~~SNfER 320 (460)
T cd01560 241 LKRGEGEKVEFSVPTGNFGNILAGYYAKKMGLPIKKLIVATNENDVLRRFFKTGRYDRRESLKQTLSPAMDILKSSNFER 320 (460)
T ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 54048980499935886020699999998399977088866862149999737960456543334686343146623999
Q ss_pred HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
Q ss_conf 99987097089999998752026510552022110001213421388999999999998639598383399999999987
Q gi|254780465|r 319 LLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACR 398 (469)
Q Consensus 319 llf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~ 398 (469)
T Consensus 321 ll~~~~~~d~~~~~~~m~~f~~~g~~~l~~~~~~~l~~~f~s~s~~d~et~~~I~~~~~~~~yliDPHTAvg~~a~~~~~ 400 (460)
T cd01560 321 LLFLLAGRDRTKVKMLMEEFEATGFLSLPKEELKKLREDFSSGSVSDEETLETIREVYEETGYLIDPHTAVGVRAAERVR 400 (460)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHH
T ss_conf 99998089678999999876217984359999999854716665377999999999999679687874799999999986
Q ss_pred HCCCCCEEEEECCCCCCCHHHHHHHHCCCC-CCCHHHHHHHCCCCCEEECCCCHHHHHHH
Q ss_conf 479983999971884349888999808798-88988988741721101068999999999
Q gi|254780465|r 399 KSSSTPMVTLATAHPSKFPDTVKAASGIVP-DCPISLEQMMRRPENCKVMNKNIDEIKKF 457 (469)
Q Consensus 399 ~~~~~p~VvLATAHPaKFpe~V~~Aig~~~-~~P~~L~~l~~k~e~~~~l~nd~~~ik~f 457 (469)
T Consensus 401 ~~~~~p~v~LaTAHPaKF~~~V~~A~g~~~~~lP~~L~~L~~k~e~~~~l~~d~~~vk~y 460 (460)
T cd01560 401 KSPGTPGVVLSTAHPAKFPEAVKEALGEEPVELPEELEGLEDLEKRHEDLLADKELLKSH 460 (460)
T ss_pred HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCC
T ss_conf 289980799956582445889999867998769989987737631356788999998467