HHsearch alignment for GI: 254780465 and conserved domain: cd01561
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=99.67 E-value=5.5e-14 Score=117.32 Aligned_cols=261 Identities=18% Similarity=0.156 Sum_probs=158.6
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
Q ss_conf 8825466213898120682388899999999731798--20799716654046799986166785599973577676033
Q gi|254780465|r 96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDH--YITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQ 173 (469)
Q Consensus 96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~--~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q 173 (469)
T Consensus 17 ~~i~~K~E~~~ptGSfK~Rga~~---~i~~a~~~g~~~~~~~vv~aSsGN~g~alA~~a~-~~Gi~~~I~~p~~-~~~~k 91 (291)
T cd01561 17 AEIYAKLEFFNPGGSVKDRIALY---MIEDAEKRGLLKPGTTIIEPTSGNTGIGLAMVAA-AKGYRFIIVMPET-MSEEK 91 (291)
T ss_pred CEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH-HCCCCEEEECCCC-CHHHH
T ss_conf 98999956889777869999999---9999998199889978998089847999999999-8099838964763-06999
Q ss_pred HCCCEEECCCCEEEEEECC----CHHHHHHHHHHHHCCHHHHCCCCCCC--CCCCCHHHCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 2131134478708997179----65888999999750154313583113--45565444011055899999874477887
Q gi|254780465|r 174 QKQMTTSEASNINVIAVQS----SFDDCQKIVKNLFSDVFFCHSVNLSG--INSINWARIMAQIVYYFVSSIALGSPNRN 247 (469)
Q Consensus 174 ~~qmtt~~~~Nv~~i~v~G----~FDDcq~~Vk~~f~D~~~~~~~~l~s--~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~ 247 (469)
T Consensus 92 ~~~i~~~-GA~--Vv~v~~~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~n~~~~--~~~~~t~g~Ei~eQl~~--~~ 161 (291)
T cd01561 92 RKLLRAL-GAE--VILTPEAEADGMKGAIAKARELAAETP---NAFWLNQFENPANP--EAHYETTAPEIWEQLDG--KV 161 (291)
T ss_pred HHHHHHC-CCE--EEEECCCCCCCHHHHHHHHHHHHHHCC---CCEEEECCCCCHHH--HHHCCHHHHHHHHHCCC--CC
T ss_conf 9999966-988--999779888789999999999998579---93884357893577--77501199999998599--87
Q ss_pred EEEEEECCCHHHHHHHHHHH-HCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCC-CHHHHHHHHHHHHC
Q ss_conf 38996346578878866777-50898770587236763356775322201023455656420013-40137889998709
Q gi|254780465|r 248 ISFSVPTGNFGDIFAGYMAK-MMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQ-IPSNFERLLFEISG 325 (469)
Q Consensus 248 i~f~VPtGNfGni~Ag~~Ak-~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~-v~SNfERllf~l~~ 325 (469)
T Consensus 162 d~vv~pvG~Gg~~~Gi~~~~k~~~p~~-~iigVep~~s~~--------~~~~~~~~~~~~gi~~~~~~~~~~~~~----- 227 (291)
T cd01561 162 DAFVAGVGTGGTITGVARYLKEKNPNV-RIVGVDPVGSVL--------FSGGPPGPHKIEGIGAGFIPENLDRSL----- 227 (291)
T ss_pred CEEEECCCCCHHHHHHHHHHHHHCCCC-EEEEEECCCCHH--------HCCCCCCCCCCCCCCCCCCCHHHHHHC-----
T ss_conf 464405686278999999999729998-799990488712--------117898885235656665624440311-----
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH--HCCCC
Q ss_conf 7089999998752026510552022110001213421388999999999998639598383399999999987--47998
Q gi|254780465|r 326 RNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACR--KSSST 403 (469)
Q Consensus 326 ~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~--~~~~~ 403 (469)
T Consensus 228 --------------------v-----------d~~~~V~d~e~~~a~~~l~~~~gi~veps~a~~laa~~~~~~~~~~~~ 276 (291)
T cd01561 228 --------------------I-----------DEVVRVSDEEAFAMARRLAREEGLLVGGSSGAAVAAALKLAKRLGPGK 276 (291)
T ss_pred --------------------C-----------CEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCC
T ss_conf --------------------8-----------779996999999999999998099883659999999999988719859
Q ss_pred CEEEEECCCCCCC
Q ss_conf 3999971884349
Q gi|254780465|r 404 PMVTLATAHPSKF 416 (469)
Q Consensus 404 p~VvLATAHPaKF 416 (469)
T Consensus 277 ~Vvvil~~~G~kY 289 (291)
T cd01561 277 TIVTILPDSGERY 289 (291)
T ss_pred EEEEEECCCCCCC
T ss_conf 8999979997055