HHsearch alignment for GI: 254780465 and conserved domain: cd06448
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=99.81 E-value=9.6e-17 Score=136.46 Aligned_cols=272 Identities=14% Similarity=0.103 Sum_probs=177.6
Q ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
Q ss_conf 4882546621389812068238889999999973-179820799716654046799986166785599973577676033
Q gi|254780465|r 95 NANEFLLELFHGPTLSFKDIAMQFIAELMDHILE-ERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQ 173 (469)
Q Consensus 95 ~~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~-~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q 173 (469)
T Consensus 15 G~~v~~K~E~~nptGSfK~Rga~~~---i~~a~~~~~~~~~~vv~aSsGN~g~alA~~A~-~~G~~~~Iv~P~~-~~~~k 89 (316)
T cd06448 15 GCNVFLKLENLQPSGSFKIRGIGHL---CQKSAKQGLNECVHVVCSSGGNAGLAAAYAAR-KLGVPCTIVVPES-TKPRV 89 (316)
T ss_pred CCEEEEEECCCCCCCCCHHHHHHHH---HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH-HCCCCEEEEECCC-CHHHH
T ss_conf 9989999546897777299999999---99999817677986999489679999999999-7398269983688-86999
Q ss_pred HCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 21311344787089971796588899999975015431358311345565444011055899999874477887389963
Q gi|254780465|r 174 QKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVP 253 (469)
Q Consensus 174 ~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VP 253 (469)
T Consensus 90 ~~~ir~~GA-~--Vi~~g~~~~~~~~~~~~~~~~~~-~~~~~v--~~~~np~~i~G~~T~~~Ei~eQl~~~~~~d~vv~~ 163 (316)
T cd06448 90 VEKLRDEGA-T--VVVHGKVWWEADNYLREELAEND-PGPVYV--HPFDDPLIWEGHSSMVDEIAQQLQSQEKVDAIVCS 163 (316)
T ss_pred HHHHHHCCC-C--EEEECCCCHHHHHHHHHHHHHCC-CCCEEE--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 999996599-3--89968982589999999998478-897983--68897667878778999999985348997099976
Q ss_pred CCCHHHHHHHHHH-HHCCCC-CCEEEEE-CCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
Q ss_conf 4657887886677-750898-7705872-367633567753222010234556564200134013788999870970899
Q gi|254780465|r 254 TGNFGDIFAGYMA-KMMGLP-IEKLIIA-TNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERLLFEISGRNSLL 330 (469)
Q Consensus 254 tGNfGni~Ag~~A-k~MGLP-I~kli~A-tN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERllf~l~~~d~~~ 330 (469)
T Consensus 164 ~G~Gg~l~G~~~~l~~~~~~~i-~iigVep~g~~~~~~s~~~g~~~~~~~~~tia~gl~~~~~~--~~~~---------- 230 (316)
T cd06448 164 VGGGGLLNGIVQGLERNGWGDI-PVVAVETEGAHSLNASLKAGKLVTLPKITSVATSLGAKTVS--SQAL---------- 230 (316)
T ss_pred CCCHHHHHHHHHHHHHHCCCCC-CEEEECCCCCHHHHHHHHCCCEECCCCCCEEEEEECCCCCC--HHHH----------
T ss_conf 7836889999999998379988-67864577875899999878854169988388762699844--9999----------
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHCC-CCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHH-----HHH----HC
Q ss_conf 999987520265105520221100012-13421388999999999998639598383399999999-----987----47
Q gi|254780465|r 331 VKEAFYSLENKKYFRIDSEHLQKMSLS-FSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAAL-----ACR----KS 400 (469)
Q Consensus 331 v~~~m~~l~~~g~~~i~~~~l~~l~~~-f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~-----~~~----~~ 400 (469)
T Consensus 231 ---------------------~~~~~~~~~~~~Vtd~ei~~a~~~l~~~egl~veps~aa~lAa~~~~~~~~~~~~~~~~ 289 (316)
T cd06448 231 ---------------------EYAQEHNIKSEVVSDRDAVQACLRFADDERILVEPACGAALAVVYSGKILDLQLEVLLT 289 (316)
T ss_pred ---------------------HHHHHCCCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCHHHHHCCCCC
T ss_conf ---------------------99986398699989999999999999977865558899999999838406776501359
Q ss_pred CCCCEEEEECC
Q ss_conf 99839999718
Q gi|254780465|r 401 SSTPMVTLATA 411 (469)
Q Consensus 401 ~~~p~VvLATA 411 (469)
T Consensus 290 ~~~~vvvil~G 300 (316)
T cd06448 290 PLDNVVVVVCG 300 (316)
T ss_pred CCCEEEEEECC
T ss_conf 98969999738