HHsearch results for GI: 254780465 and protein with PDBid: 1p5j_A
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=99.85 E-value=4.7e-19 Score=150.98 Aligned_cols=260 Identities=12% Similarity=0.102 Sum_probs=179.5
Q ss_pred CCEEEEC-------CCCCEE-EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCE
Q ss_conf 8604772-------488254-66213898120682388899999999731798207997166540467999861667855
Q gi|254780465|r 88 VTPLIQL-------NANEFL-LELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRIN 159 (469)
Q Consensus 88 ~~pl~~l-------~~~~~v-lELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~ 159 (469)
.+||.++ +.+.|+ +|-++ ||+||||.++..+ +....++. ...|++||||+||.|.+.+.+ .-+++
T Consensus 46 ~TPL~~~~~Ls~~~G~~I~~K~E~~n-ptGSfKdRga~~~---i~~a~~~g--~~~vv~aSsGN~G~AlA~aa~-~~Gi~ 118 (372)
T 1p5j_A 46 KTPIRDSMALSKMAGTSVYLKMDSAQ-PSGSFKIRGIGHF---CKRWAKQG--CAHFVCSSAGNAGMAAAYAAR-QLGVP 118 (372)
T ss_dssp CCCEEEEHHHHHHHTSCEEEECGGGS-GGGBTTHHHHHHH---HHHHHHTT--CCEEEECCSSHHHHHHHHHHH-HHTCC
T ss_pred ECCCEEHHHHHHHHCCEEEEEECCCC-CCCCCHHHHHHHH---HHHHHHCC--CCEEEEECCCHHHHHHHHHHH-HCCCC
T ss_conf 78763237888987998999964689-7778399999999---99999769--987999796699999999999-82998
Q ss_pred EEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHH
Q ss_conf 99973577676033213113447870899717965888999999750154313583113455654440110558999998
Q gi|254780465|r 160 MYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSI 239 (469)
Q Consensus 160 v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~ 239 (469)
+.|+.|.+ +++....+|... +..++.+.+++|||...++++..+.. .....-..-|+.++.+|....+..+.
T Consensus 119 ~~Iv~p~~-~~~~k~~~l~~~---Ga~Vi~~~~~~~~a~~~a~~~a~~~~----~~~~~~~~~n~~~i~g~~t~~~Ei~~ 190 (372)
T 1p5j_A 119 ATIVVPGT-TPALTIERLKNE---GATCKVVGELLDEAFELAKALAKNNP----GWVYIPPFDDPLIWEGHASIVKELKE 190 (372)
T ss_dssp EEEEECTT-CCHHHHHHHHHT---TCEEEECCSCHHHHHHHHHHHHHHST----TEEECCSSCCHHHHHHHTHHHHHHHH
T ss_pred CEEECCCC-CCHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHCCCC----CEEEECCCCCHHHHHHHCCHHHHHHH
T ss_conf 33027887-748886455525---83687751212568888887641468----76981266616667652021899998
Q ss_pred HHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECC-CCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 744778873899634657887886677-750898770587236-763356775322201023455656420013401378
Q gi|254780465|r 240 ALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATN-ENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFE 317 (469)
Q Consensus 240 ~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN-~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfE 317 (469)
|+.. .+..+++|.|.-|.+.+.+.+ ++++.|--+++.... ..+.+++-+..|.........|++.++.+..+ .+
T Consensus 191 ql~~--~pd~i~~~~G~Gg~~~Gi~~~~~~~~~~~~~ii~ve~~g~~~~~~s~~~g~~v~~~~~~t~a~glg~~~~--~~ 266 (372)
T 1p5j_A 191 TLWE--KPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTV--GS 266 (372)
T ss_dssp HCSS--CCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSC--CH
T ss_pred HHCC--CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEECEECCCCHHHHHHHHCCCEEEEECCCCEEECCCCCCC--CH
T ss_conf 5337--9875999977637889999999985288872000002688389999987974653023422311368864--24
Q ss_pred HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHH
Q ss_conf 8999870970899999987520265105520221100012134213889999999999986395983833999999999
Q gi|254780465|r 318 RLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALA 396 (469)
Q Consensus 318 Rllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~ 396 (469)
+. |++. ++ . .-....|+|+|+.++++.+++++|++++|.+|++++++.+
T Consensus 267 ~~-~~~~-----------~~----------------~--~d~~~~Vsd~e~~~a~~~l~~~eGi~~epSsaaalAal~~ 315 (372)
T 1p5j_A 267 QA-LKLF-----------QE----------------H--PIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYS 315 (372)
T ss_dssp HH-HHHH-----------HH----------------S--CEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred HH-HHHH-----------HH----------------C--CCEEEEECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHH
T ss_conf 45-6788-----------75----------------4--9879998999999999999998496870889999999999