>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...

Probab=99.62 E-value=3.3e-14 Score=117.41 Aligned_cols=352 Identities=13% Similarity=0.079 Sum_probs=183.8 Q ss_pred HHCCCC-CCCCCCCCCCC-CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECC- Q ss_conf 861567-87863286107-888988998770999899999999875157899899999999986304766786047724- Q gi|254780465|r 19 ILSGLA-TDGGLYIPKYI-PRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLN- 95 (469) Q Consensus 19 ~~~Gla-~DGGL~vP~~~-p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~- 95 (469) +++|.= .-||-||||.+ |.| ++|.. .|.++ .-+.+|- ++++.+..+ |-. ..+||.++. T Consensus 3 ~~~~~~~~~~~~~~pe~l~~~~--~~l~~----~~~~~-------~~~~~f~-~~~~~~~~~-~~g----rpTPL~~~~~ 63 (396) T 1qop_B 3 LLNPYFGEFGGMYVPQILMPAL--NQLEE----AFVSA-------QKDPEFQ-AQFADLLKN-YAG----RPTALTKCQN 63 (396) T ss_dssp SSCCEETTEEEEESCGGGHHHH--HHHHH----HHHHH-------HTCHHHH-HHHHHHHHH-TTC----CSCCEEECHH T ss_pred CCCCCCCCCCCEECCHHHHHHH--HHHHH----HHHHH-------HCCHHHH-HHHHHHHHH-CCC----CCCHHHEHHH T ss_conf 7778656838994868889999--99999----99999-------6198999-999999874-489----9966766485 Q ss_pred ------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC Q ss_conf ------88254662138981206823888999999997317982079971665404679998616678559997357767 Q gi|254780465|r 96 ------ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI 169 (469) Q Consensus 96 ------~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v 169 (469) .+.|+=-=+.-||+||||.++-.+. ..+++.++...|+++|||.+|.|.+.+.+ .-+++++|+-|..-. T Consensus 64 Ls~~~G~~IylK~E~lnptGS~KdR~a~~~i----~~A~~~G~~~~vve~saGN~G~a~A~aaa-~~Gl~~~I~mp~~~~ 138 (396) T 1qop_B 64 ITAGTRTTLYLKREDLLHGGAHKTNQVLGQA----LLAKRMGKSEIIAETGAGQHGVASALASA-LLGLKCRIYMGAKDV 138 (396) T ss_dssp HHTTSSEEEEEEEGGGSTTSBTHHHHHHHHH----HHHHHTTCCEEEEEESSSHHHHHHHHHHH-HHTCEEEEEEEHHHH T ss_pred HHHHHCCEEEEEECCCCCCCCCCHHHHHHHH----HHHHHCCCCCEEEECCCCHHHHHHHHHHH-HHCCCEEEEECCCCH T ss_conf 5564688799997678888874164899999----99998699835730360069999999998-605745998425546 Q ss_pred --CHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHH------CCCCHHHHHHHHHHH Q ss_conf --603321311344787089971796588899999975015431358311345565444------011055899999874 Q gi|254780465|r 170 --SVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWAR------IMAQIVYYFVSSIAL 241 (469) Q Consensus 170 --S~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~R------il~Q~vyYf~a~~~~ 241 (469) +.....+|-.. |-. ++.|...-+....-+.+...|..-.........+|....- ..+|.+.--.+..|+ T Consensus 139 ~~~~~kv~~mk~~-GAe--V~~V~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~e~~~q~ 215 (396) T 1qop_B 139 ERQSPNVFRMRLM-GAE--VIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQI 215 (396) T ss_dssp HHCHHHHHHHHHT-TCE--EEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHH T ss_pred HHHHHHHHHHHHC-CCE--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 5659999999974-976--9983688631455599999998863688998742534678762110245546524289999 Q ss_pred C--CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEE--------CCCCCHHHHHHHCCCHHC----------CCCC Q ss_conf 4--7788738996346578878866777508987705872--------367633567753222010----------2345 Q gi|254780465|r 242 G--SPNRNISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIA--------TNENDTLVRMFDMGMYRP----------EIVM 301 (469) Q Consensus 242 ~--~~~~~i~f~VPtGNfGni~Ag~~Ak~MGLPI~kli~A--------tN~NdiL~rf~~tG~y~~----------~~~~ 301 (469) . ....+-.+++|+|.-||+.+.|.+.+. .+--+++.. +..+......-..|.... .... T Consensus 216 ~~~~g~~pD~vv~~vGgG~~~~G~~~~~~~-~~~~~~ig~~~~~~g~~~~~~~a~~~~g~~g~~~~~~~~~~~~~~g~~~ 294 (396) T 1qop_B 216 LDKEGRLPDAVIACVGGGSNAIGMFADFIN-DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIE 294 (396) T ss_dssp HHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBC T ss_pred HHHHCCCCCEEEEEECCCCCHHHEEHHHCC-CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC T ss_conf 998199787689831676402310000123-6643210226612135666655420258643334445640103787756 Q ss_pred CCCCCCCCCCCHHH-HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC Q ss_conf 56564200134013-78899987097089999998752026510552022110001213421388999999999998639 Q gi|254780465|r 302 ETTSPAMDIQIPSN-FERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSN 380 (469) Q Consensus 302 ~T~SpsMDI~v~SN-fERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~g 380 (469) .+.|.+..+..+.- -+...++-. + ......|+|+|++++++.+.+..| T Consensus 295 ~~~s~~~gl~~~g~~~~~~~l~~~-----------------~--------------~~~~~~VtD~Eal~a~~~Lar~EG 343 (396) T 1qop_B 295 ESYSISAGLDFPSVGPQHAYLNSI-----------------G--------------RADYVSITDDEALEAFKTLCRHEG 343 (396) T ss_dssp CCCCSSGGGCCSSCCHHHHHHHHT-----------------T--------------SSEEEEEEHHHHHHHHHHHHHHHS T ss_pred CCCCHHHCCCCCCCCHHHHHHHHC-----------------C--------------CEEEEEECHHHHHHHHHHHHHHCC T ss_conf 777501101357752567999862-----------------8--------------649999899999999999999579 Q ss_pred CEECCCHHHHHHHHHHHH-HC--CCCCEEEEECCCCCCCHHHHHHHHCCCCC Q ss_conf 598383399999999987-47--99839999718843498889998087988 Q gi|254780465|r 381 YLVDPHTAVGIHAALACR-KS--SSTPMVTLATAHPSKFPDTVKAASGIVPD 429 (469) Q Consensus 381 yiiDPHTAvG~~aa~~~~-~~--~~~p~VvLATAHPaKFpe~V~~Aig~~~~ 429 (469) ++..|-+|.+++++.+.- .. .+..+|+.-|-|--|-.+++.+.+..+-+ T Consensus 344 I~~~~esa~Ava~A~k~a~~~~~~~~~VVv~lsG~G~kD~~~~~~~l~~~g~ 395 (396) T 1qop_B 344 IIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDILKARGE 395 (396) T ss_dssp CCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHHHHHHC----- T ss_pred CEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC T ss_conf 8316717999999999864537999989999688973479999999986588

HHsearch results for GI: 254780465 and protein with PDBid: 1qop_B