HHsearch results for GI: 254780465 and protein with PDBid: 1wkv_A
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix K1} SCOP: c.79.1.1
Probab=99.52 E-value=5.9e-12 Score=101.77 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=179.2
Q ss_pred HHHHHHCCCCHHHHHHHHHHHH----CCCCC-CHHHHHHHHH----------------HHHHHCC---------------
Q ss_conf 8998770999899999999875----15789-9899999999----------------9863047---------------
Q gi|254780465|r 41 KEIKDLRGLSYQEIALFIFRLF----IGQEI-KSSKLRDIVN----------------RSYHCFR--------------- 84 (469)
Q Consensus 41 ~~~~~~~~~sy~e~a~~il~~f----~~~~i-~~~~l~~ii~----------------~ay~~f~--------------- 84 (469)
+.+...++.||-|.|-+||+-= ++.-- .++..+.+-- +...+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (389)
T 1wkv_A 11 DVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGEMVFPSPLDF 90 (389)
T ss_dssp THHHHCCSSTTHHHHHHHHHHTEEECBSSGGGCHHHHHHHHHHTCSEEEBSSSCEEETTTTTTTCCCSCTTCEESSHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCHHHH
T ss_conf 77776324279999999986035030579975478999999844554556766420167617310489753442799998
Q ss_pred --CCCCCEEEECCC------CCEEEEECCCCCC-CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf --667860477248------8254662138981-2068238889999999973179820799716654046799986166
Q gi|254780465|r 85 --NAAVTPLIQLNA------NEFLLELFHGPTL-SFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGK 155 (469)
Q Consensus 85 --~~~~~pl~~l~~------~~~vlELfHGPT~-aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~ 155 (469)
+.-++||.++.. +.|+=-=++.||. ||||.++..+ +....++..+..+|++||||.||.|.+.+.+ .
T Consensus 91 ~~~~~pTPLirl~~~~~~G~~Iy~KlE~~NPtGgSfKdR~A~~~---I~~A~~~~~~g~tVveaSSGN~G~AlA~~aa-~ 166 (389)
T 1wkv_A 91 FERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEI---ISRLSRRVEKGSLVADATSSNFGVALSAVAR-L 166 (389)
T ss_dssp HHHSCSCCEEECCCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHH---HHHHTTTSCTTCEEEEECCHHHHHHHHHHHH-H
T ss_pred HCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH---HHHHHHHCCCCCEEEEECCCHHHHHHHHHHH-H
T ss_conf 46899998777877888898999985478999876099999999---9999860799999998584099999999999-8
Q ss_pred CCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCC-CCCCCHHHCCCCHHHH
Q ss_conf 785599973577676033213113447870899717965888999999750154313583113-4556544401105589
Q gi|254780465|r 156 KRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSG-INSINWARIMAQIVYY 234 (469)
Q Consensus 156 ~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s-~NSIN~~Ril~Q~vyY 234 (469)
.++++.|+-|.+ +|+..+.+|... |-.|....-..+.+++..-..+...+. .-+.+.. -|-.||- ..|....
T Consensus 167 ~Gik~~IvmP~~-~s~~k~~~lra~-GAeVi~~p~~~~~~~~~~ra~~~a~~~---~~~~~~q~~N~~n~~--~h~~ttg 239 (389)
T 1wkv_A 167 YGYRARVYLPGA-AEEFGKLLPRLL-GAQVIVDPEAPSTVHLLPRVMKDSKNE---GFVHVNQFYNDANFE--AHMRGTA 239 (389)
T ss_dssp TTCEEEEEEETT-SCHHHHHHHHHT-TCEEEEETTCSSSGGGHHHHHHHHHHH---CCEECCTTTCHHHHH--HHHHTHH
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHC-CCCEEECCCCCCHHHHHHHHHHHHHHC---CCCCCCCCCCCCCHH--HHHHHHH
T ss_conf 199689996360-254899999856-985586586532578999999986503---775455566850044--4420299
Q ss_pred HHHHHHHCCCCCCE-EEEEECCCHHHHHHHHH-HHHCCCCCCEEEEECCCC-CHHHHHHHCCCHHCCCCCCCCCCCCCCC
Q ss_conf 99998744778873-89963465788788667-775089877058723676-3356775322201023455656420013
Q gi|254780465|r 235 FVSSIALGSPNRNI-SFSVPTGNFGDIFAGYM-AKMMGLPIEKLIIATNEN-DTLVRMFDMGMYRPEIVMETTSPAMDIQ 311 (469)
Q Consensus 235 f~a~~~~~~~~~~i-~f~VPtGNfGni~Ag~~-Ak~MGLPI~kli~AtN~N-diL~rf~~tG~y~~~~~~~T~SpsMDI~ 311 (469)
..-+.|+...+..+ .+++|.|.-|.+.+.+. .|.++-.+ |+|...-.+ +.+ +.. -.|+
T Consensus 240 ~EI~eQl~~~g~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~v-kiVgVeP~~~~~i---------------~g~---~~i~ 300 (389)
T 1wkv_A 240 REIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSI-RAVLVQPAQGDSI---------------PGI---RRVE 300 (389)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTC-EEEEEEECTTCCC---------------TTC---CCGG
T ss_pred HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHECCCCC-EEEEEECCCCCCC---------------CCC---CCCC
T ss_conf 99999845579844799982699710888646451108998-7999974777537---------------886---2245
Q ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHH
Q ss_conf 40137889998709708999999875202651055202211000121342138899999999999863959838339999
Q gi|254780465|r 312 IPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGI 391 (469)
Q Consensus 312 v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~ 391 (469)
.+-.+..+ +.....-..|+|+|..++++.+.++.|+++-|-++.++
T Consensus 301 ~g~~~~~~----------------------------------~d~~d~v~~VsdeEAi~a~r~La~~EGI~vGpSSGAal 346 (389)
T 1wkv_A 301 TGMLWINM----------------------------------LDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAV 346 (389)
T ss_dssp GCCSHHHH----------------------------------SCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHH
T ss_pred CCCCCCCC----------------------------------CCCCEEEEEECHHHHHHHHHHHHHHHCCEEEHHHHHHH
T ss_conf 68767654----------------------------------76442999989999999999999980988809999999
Q ss_pred HHHHHHHHCC---CCCEEEEECCCCCCCHHHHHHHHC
Q ss_conf 9999987479---983999971884349888999808
Q gi|254780465|r 392 HAALACRKSS---STPMVTLATAHPSKFPDTVKAASG 425 (469)
Q Consensus 392 ~aa~~~~~~~---~~p~VvLATAHPaKFpe~V~~Aig 425 (469)
.++.+..... ...+|++-+-+.-|.-+++..++.
T Consensus 347 aaa~kla~~~~~~~~~vVvIl~D~G~rYlst~~n~~~ 383 (389)
T 1wkv_A 347 KALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE 383 (389)
T ss_dssp HHHHHHHHTTCSCSEEEEEEECBBGGGCHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999998621689898999987897441777632330