HHsearch results for GI: 254780465 and protein with PDBid: 1x1q_A
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus HB8}
Probab=99.64 E-value=2.4e-13 Score=111.40 Aligned_cols=346 Identities=13% Similarity=0.010 Sum_probs=189.4
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECC--------
Q ss_conf 787863286107888988998770999899999999875157899899999999986304766786047724--------
Q gi|254780465|r 24 ATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFRLFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLN-------- 95 (469)
Q Consensus 24 a~DGGL~vP~~~p~~~~~~~~~~~~~sy~e~a~~il~~f~~~~i~~~~l~~ii~~ay~~f~~~~~~pl~~l~-------- 95 (469)
..-||-||||.+-. ..++| .....+..-+.+| .++|+.+..+ |.. .++||.++.
T Consensus 31 ~~~gg~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~f-~~~~~~~~~~-~~g----rPTPL~~a~rLs~~lgg 92 (418)
T 1x1q_A 31 GPYGGRYVPETLIP-ALEEL-----------EAAYREAKKDPAF-LEELDHYLRQ-FAG----RPTPLYHAKRLSEYWGG 92 (418)
T ss_dssp TTEECCCCCTTTHH-HHHHH-----------HHHHHHHHHCHHH-HHHHHHHHHH-TTC----CSCCEEECHHHHHHHTS
T ss_pred CCCCCEECCHHHHH-HHHHH-----------HHHHHHHHCCHHH-HHHHHHHHHH-CCC----CCCCCEEHHHHHHHCCC
T ss_conf 88399968398999-99999-----------9999999669899-9999999875-389----99733483766976289
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCC--CHHH
Q ss_conf 88254662138981206823888999999997317982079971665404679998616678559997357767--6033
Q gi|254780465|r 96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRI--SVVQ 173 (469)
Q Consensus 96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~v--S~~Q 173 (469)
.+.|+=-=+.-||+||||.++..+.. .+++.+++.+|.++|+|.+|.|.+.+.+ .-++++.|+.|..-. ....
T Consensus 93 ~~IylKrEdlnptGS~K~r~a~~~il----~Ak~~Gk~~~Iaet~aGnhG~a~A~aaa-~~Gl~c~i~m~~~~~~~~~~n 167 (418)
T 1x1q_A 93 AQVFLKREDLLHTGAHKINNTLGQAL----LARRMGKRRVIAETGAGQHGVSVATVAA-LFGLECVVYMGEEDVRRQALN 167 (418)
T ss_dssp SEEEEEEGGGSGGGBTTHHHHHHHHH----HHHHHTCCEEEEECSSSHHHHHHHHHHH-HHTCEEEEEEEHHHHHTCHHH
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHH----HHHHCCCCCEEEECCCCHHHHHHHHHHH-HCCCCEEEECCCCHHHHHHHH
T ss_conf 76999863588877642179999999----9987589847883074479999999999-849865871367617665668
Q ss_pred HCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHH------HHHHHHCCC--C
Q ss_conf 21311344787089971796588899999975015431358311345565444011055899------999874477--8
Q gi|254780465|r 174 QKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYF------VSSIALGSP--N 245 (469)
Q Consensus 174 ~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf------~a~~~~~~~--~ 245 (469)
..+|... |.. ++.|....+.....+.+...|+.-.........+|.+-..-.|++|-.| ....|+.+. .
T Consensus 168 v~~~~~l-Ga~--vv~v~~g~~tl~da~~ea~~~~~~~~~~~~~~~g~~~~p~~~~~~v~~~~~~ig~E~~~Q~~e~~g~ 244 (418)
T 1x1q_A 168 VFRMKLL-GAE--VRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGR 244 (418)
T ss_dssp HHHHHHT-TCE--EEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHHHHHHHHHHHHSS
T ss_pred HHHHHHC-CCE--EEEECCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9999960-965--8982577543789999999999857554143046356887532230563064999998899998099
Q ss_pred CCEEEEEECCCHHHHHHHHHHHH-CCCCCCEEEEEC-----CCCCHHHHHHHCCCHHC-----------C--CCCC--CC
Q ss_conf 87389963465788788667775-089877058723-----67633567753222010-----------2--3455--65
Q gi|254780465|r 246 RNISFSVPTGNFGDIFAGYMAKM-MGLPIEKLIIAT-----NENDTLVRMFDMGMYRP-----------E--IVME--TT 304 (469)
Q Consensus 246 ~~i~f~VPtGNfGni~Ag~~Ak~-MGLPI~kli~At-----N~NdiL~rf~~tG~y~~-----------~--~~~~--T~ 304 (469)
.+-.+++|.|+-||+.+.|...+ ..=|.-++|... -..+....-+..|.-.. . .... |+
T Consensus 245 ~pD~vv~~vGgGs~~~G~~~~f~~~~d~~v~liGVEa~G~g~~~~~~a~~~~~G~~~v~~g~~s~~~~~~~g~~~~~~si 324 (418)
T 1x1q_A 245 LPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSV 324 (418)
T ss_dssp CCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEEEEBCCC-----------
T ss_pred CCCEEEEECCCCCCCCCEEEHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCCCEE
T ss_conf 88738993268654120100222146666159999607887773045668866997765203321311468774434121
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEC
Q ss_conf 64200134013788999870970899999987520265105520221100012134213889999999999986395983
Q gi|254780465|r 305 SPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVD 384 (469)
Q Consensus 305 SpsMDI~v~SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiD 384 (469)
|.-.|-... ..|-. .+.+ ...-...+|+|+|+++.++.+.+..|++..
T Consensus 325 s~Gl~~~~v-g~~~~-------------~l~~------------------~~~~~~v~VtDeEa~~a~~~Lar~EGIi~~ 372 (418)
T 1x1q_A 325 SAGLDYPGV-GPEHS-------------YYAD------------------AGVAEYASVTDEEALEGFKLLARLEGIIPA 372 (418)
T ss_dssp -----CSBC-CHHHH-------------HHHH------------------HTSEEEEEECHHHHHHHHHHHHHHHSCCBC
T ss_pred CCCCCCCCC-CHHHH-------------HHHH------------------CCCEEEEEECHHHHHHHHHHHHHHCCCEEC
T ss_conf 366567885-37889-------------9985------------------787089998999999999999997799665
Q ss_pred CCHHHHHHHHHHHHH--CCCCCEEEEECCCCCCCHHHHHHHHCCC
Q ss_conf 833999999999874--7998399997188434988899980879
Q gi|254780465|r 385 PHTAVGIHAALACRK--SSSTPMVTLATAHPSKFPDTVKAASGIV 427 (469)
Q Consensus 385 PHTAvG~~aa~~~~~--~~~~p~VvLATAHPaKFpe~V~~Aig~~ 427 (469)
|-+|.+++++.+... ..+..+|+.-|.|-.|-+++|.+.+|.+
T Consensus 373 lesa~AvA~a~kla~~l~~~~~VVv~lsG~G~KD~~~v~~~lg~~ 417 (418)
T 1x1q_A 373 LESAHAIAYAAKVVPEMDKDQVVVINLSGRGDKDVTEVMRLLGGE 417 (418)
T ss_dssp HHHHHHHHHHHHHTTTSCTTCEEEEEECBBGGGTHHHHHHTCCC-
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCC
T ss_conf 668999999999757718999699996889600599999986578