HHsearch results for GI: 254780465 and protein with PDBid: 2gn0_A
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, L-threonine metabolism, alternate conformation lyase; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=99.81 E-value=1.9e-17 Score=139.78 Aligned_cols=279 Identities=14% Similarity=0.104 Sum_probs=189.2
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHC
Q ss_conf 88254662138981206823888999999997317982079971665404679998616678559997357767603321
Q gi|254780465|r 96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQK 175 (469)
Q Consensus 96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~ 175 (469)
.++|+=-=++-||+||||.++..+ +.+.. ++++...|+++|||.||.|.+.+.+ .-++++.|+.|.+ +++....
T Consensus 55 ~~i~~K~E~~nPtGSfKdRga~~~---i~~a~-~~~~~~~iv~~SsGN~g~a~A~~a~-~~g~~~~i~~p~~-~~~~k~~ 128 (342)
T 2gn0_A 55 GEIFLKFENMQRTGSFKIRGAFNK---LSSLT-EAEKRKGVVACSAGNHAQGVSLSCA-MLGIDGKVVMPKG-APKSKVA 128 (342)
T ss_dssp SEEEEEEGGGSGGGBTHHHHHHHH---HHHSC-HHHHHTCEEEECSSHHHHHHHHHHH-HHTCCEEEEECTT-SCHHHHH
T ss_pred CEEEEEECCCCCCCCHHHHHHHHH---HHHHH-HHCCCCCEEEECCCHHHHHHHHHHH-HCCCCEEECCCCC-CHHHHHH
T ss_conf 989999678897459499999999---99998-7088881487576399999999999-8199636305654-2078888
Q ss_pred CCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 31134478708997179658889999997501543135831134556544401105589999987447788738996346
Q gi|254780465|r 176 QMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTG 255 (469)
Q Consensus 176 qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtG 255 (469)
+|.... ..++.+.+++++|.....++..+... +.+ -+.-|..++.+|...-...+-|+. +.-.+++|+|
T Consensus 129 ~l~~~G---A~V~~~~~~~~~~~~~~~~~~~~~g~---~~~--~~~~~p~~~~g~~t~a~Ei~~q~~---~~d~vv~~vG 197 (342)
T 2gn0_A 129 ATCDYS---AEVVLHGDNFNDTIAKVSEIVETEGR---IFI--PPYDDPKVIAGQGTIGLEIMEDLY---DVDNVIVPIG 197 (342)
T ss_dssp HHHHHS---CEEEECCSSHHHHHHHHHHHHHHHCC---EEC--CSSSSHHHHHHHHHHHHHHHHHCT---TCCEEEEECS
T ss_pred HHHCCC---CEEEECCCCCCHHHHHHHHHHHCCCC---CCC--CCCCCHHHHHHHHHHHHHHHHHHC---CCCEEEEEEC
T ss_conf 765258---34753157841125778886411698---556--777881699999999999999708---8986999736
Q ss_pred CHHHHHHHHHH-HHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 57887886677-75089877058723676335677532220102345565642001340137889998709708999999
Q gi|254780465|r 256 NFGDIFAGYMA-KMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEA 334 (469)
Q Consensus 256 NfGni~Ag~~A-k~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~ 334 (469)
+-|.+.+-+.+ +.++--++-+.+-....+.+++.+..|.........|++.++++..|++..+-+..
T Consensus 198 ~Gg~~~Gi~~~~~~~~~~~~i~~v~~~~~~~~~~~~~~g~~~~~~~~~t~~~~~~~~~~~~~~~~~~~------------ 265 (342)
T 2gn0_A 198 GGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVR------------ 265 (342)
T ss_dssp SSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHH------------
T ss_pred CCHHHHHHEEHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH------------
T ss_conf 75787743212211587633655420578536678755975435567753433467984277899998------------
Q ss_pred HHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH----CCCCCEEEEEC
Q ss_conf 87520265105520221100012134213889999999999986395983833999999999874----79983999971
Q gi|254780465|r 335 FYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRK----SSSTPMVTLAT 410 (469)
Q Consensus 335 m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~~----~~~~p~VvLAT 410 (469)
+.. -....|+|+|+.++++.++++.|++++|.+|+++.++.+... .++.-.++|.+
T Consensus 266 ------------------~~~--d~~v~V~d~e~~~a~~~L~~~eGi~~eps~a~a~Aal~~~~~~~~~~~~~vVvvl~G 325 (342)
T 2gn0_A 266 ------------------ELV--DDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHIQNRKTVSIISG 325 (342)
T ss_dssp ------------------HHC--CEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHHTTSEEEEEECB
T ss_pred ------------------HCC--CCEEEECHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf ------------------618--970788999999999999998690771679999999999876423899988999658
Q ss_pred CCCCCCHHHHHHHHC
Q ss_conf 884349888999808
Q gi|254780465|r 411 AHPSKFPDTVKAASG 425 (469)
Q Consensus 411 AHPaKFpe~V~~Aig 425 (469)
++ .=.+.+.+.++
T Consensus 326 Gn--id~~~~~~~~~ 338 (342)
T 2gn0_A 326 GN--IDLSRVSQITG 338 (342)
T ss_dssp CC--CCHHHHHHHHC
T ss_pred CC--CCHHHHHHHHH
T ss_conf 99--99999999986