HHsearch results for GI: 254780465 and protein with PDBid: 2gn0_A

>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, L-threonine metabolism, alternate conformation lyase; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=99.81  E-value=1.9e-17  Score=139.78  Aligned_cols=279  Identities=14%  Similarity=0.104  Sum_probs=189.2

Q ss_pred             CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHC
Q ss_conf             88254662138981206823888999999997317982079971665404679998616678559997357767603321
Q gi|254780465|r   96 ANEFLLELFHGPTLSFKDIAMQFIAELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQK  175 (469)
Q Consensus        96 ~~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~~~~~il~ATSGDTGsAa~~a~~~~~~i~v~vlyP~g~vS~~Q~~  175 (469)
                      .++|+=-=++-||+||||.++..+   +.+.. ++++...|+++|||.||.|.+.+.+ .-++++.|+.|.+ +++....
T Consensus        55 ~~i~~K~E~~nPtGSfKdRga~~~---i~~a~-~~~~~~~iv~~SsGN~g~a~A~~a~-~~g~~~~i~~p~~-~~~~k~~  128 (342)
T 2gn0_A           55 GEIFLKFENMQRTGSFKIRGAFNK---LSSLT-EAEKRKGVVACSAGNHAQGVSLSCA-MLGIDGKVVMPKG-APKSKVA  128 (342)
T ss_dssp             SEEEEEEGGGSGGGBTHHHHHHHH---HHHSC-HHHHHTCEEEECSSHHHHHHHHHHH-HHTCCEEEEECTT-SCHHHHH
T ss_pred             CEEEEEECCCCCCCCHHHHHHHHH---HHHHH-HHCCCCCEEEECCCHHHHHHHHHHH-HCCCCEEECCCCC-CHHHHHH
T ss_conf             989999678897459499999999---99998-7088881487576399999999999-8199636305654-2078888


Q ss_pred             CCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf             31134478708997179658889999997501543135831134556544401105589999987447788738996346
Q gi|254780465|r  176 QMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIALGSPNRNISFSVPTG  255 (469)
Q Consensus       176 qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf~a~~~~~~~~~~i~f~VPtG  255 (469)
                      +|....   ..++.+.+++++|.....++..+...   +.+  -+.-|..++.+|...-...+-|+.   +.-.+++|+|
T Consensus       129 ~l~~~G---A~V~~~~~~~~~~~~~~~~~~~~~g~---~~~--~~~~~p~~~~g~~t~a~Ei~~q~~---~~d~vv~~vG  197 (342)
T 2gn0_A          129 ATCDYS---AEVVLHGDNFNDTIAKVSEIVETEGR---IFI--PPYDDPKVIAGQGTIGLEIMEDLY---DVDNVIVPIG  197 (342)
T ss_dssp             HHHHHS---CEEEECCSSHHHHHHHHHHHHHHHCC---EEC--CSSSSHHHHHHHHHHHHHHHHHCT---TCCEEEEECS
T ss_pred             HHHCCC---CEEEECCCCCCHHHHHHHHHHHCCCC---CCC--CCCCCHHHHHHHHHHHHHHHHHHC---CCCEEEEEEC
T ss_conf             765258---34753157841125778886411698---556--777881699999999999999708---8986999736


Q ss_pred             CHHHHHHHHHH-HHCCCCCCEEEEECCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             57887886677-75089877058723676335677532220102345565642001340137889998709708999999
Q gi|254780465|r  256 NFGDIFAGYMA-KMMGLPIEKLIIATNENDTLVRMFDMGMYRPEIVMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEA  334 (469)
Q Consensus       256 NfGni~Ag~~A-k~MGLPI~kli~AtN~NdiL~rf~~tG~y~~~~~~~T~SpsMDI~v~SNfERllf~l~~~d~~~v~~~  334 (469)
                      +-|.+.+-+.+ +.++--++-+.+-....+.+++.+..|.........|++.++++..|++..+-+..            
T Consensus       198 ~Gg~~~Gi~~~~~~~~~~~~i~~v~~~~~~~~~~~~~~g~~~~~~~~~t~~~~~~~~~~~~~~~~~~~------------  265 (342)
T 2gn0_A          198 GGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVR------------  265 (342)
T ss_dssp             SSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHH------------
T ss_pred             CCHHHHHHEEHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH------------
T ss_conf             75787743212211587633655420578536678755975435567753433467984277899998------------


Q ss_pred             HHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHH----CCCCCEEEEEC
Q ss_conf             87520265105520221100012134213889999999999986395983833999999999874----79983999971
Q gi|254780465|r  335 FYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRK----SSSTPMVTLAT  410 (469)
Q Consensus       335 m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~aa~~~~~----~~~~p~VvLAT  410 (469)
                                        +..  -....|+|+|+.++++.++++.|++++|.+|+++.++.+...    .++.-.++|.+
T Consensus       266 ------------------~~~--d~~v~V~d~e~~~a~~~L~~~eGi~~eps~a~a~Aal~~~~~~~~~~~~~vVvvl~G  325 (342)
T 2gn0_A          266 ------------------ELV--DDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHIQNRKTVSIISG  325 (342)
T ss_dssp             ------------------HHC--CEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHHTTSEEEEEECB
T ss_pred             ------------------HCC--CCEEEECHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf             ------------------618--970788999999999999998690771679999999999876423899988999658


Q ss_pred             CCCCCCHHHHHHHHC
Q ss_conf             884349888999808
Q gi|254780465|r  411 AHPSKFPDTVKAASG  425 (469)
Q Consensus       411 AHPaKFpe~V~~Aig  425 (469)
                      ++  .=.+.+.+.++
T Consensus       326 Gn--id~~~~~~~~~  338 (342)
T 2gn0_A          326 GN--IDLSRVSQITG  338 (342)
T ss_dssp             CC--CCHHHHHHHHC
T ss_pred             CC--CCHHHHHHHHH
T ss_conf             99--99999999986