HHsearch results for GI: 254780465 and protein with PDBid: 2pqm_A
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica hm-1} PDB: 3bm5_A*
Probab=99.53 E-value=1.8e-12 Score=105.38 Aligned_cols=275 Identities=17% Similarity=0.109 Sum_probs=162.5
Q ss_pred CEEEECC---C--------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf 6047724---8--------82546621389812068238889999999973179--820799716654046799986166
Q gi|254780465|r 89 TPLIQLN---A--------NEFLLELFHGPTLSFKDIAMQFIAELMDHILEERD--HYITIVGATSGDTGAAAIKAFAGK 155 (469)
Q Consensus 89 ~pl~~l~---~--------~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~--~~~~il~ATSGDTGsAa~~a~~~~ 155 (469)
+||.++. + +.|+=-=++-||+||||.++.. ++..+++... ...+|++||||.+|.|.+.+.+ .
T Consensus 24 TPLi~l~~l~~~~~~~~g~~iy~K~E~~nPtGSfKdR~A~~---~i~~a~~~g~~~~g~~vv~aSsGN~g~alA~~a~-~ 99 (343)
T 2pqm_A 24 TPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFN---IVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGA-V 99 (343)
T ss_dssp CCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHH---HHHHHHHHTSSCTTCEEEEECSSHHHHHHHHHHH-H
T ss_pred CCCEECCCCCCHHCCCCCCEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH-H
T ss_conf 95068633240118777988999966889877789999999---9999996485589978999467526899999999-8
Q ss_pred CCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHH
Q ss_conf 78559997357767603321311344787089971796588899999975015431358311345565444011055899
Q gi|254780465|r 156 KRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYF 235 (469)
Q Consensus 156 ~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf 235 (469)
.++++.|+-|.. +|+....+|..... .++.+++..|+.....+..-...+- ....+..-..-|+.++.+|-.-..
T Consensus 100 ~g~~~~iv~p~~-~~~~k~~~l~~~GA---~v~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~g~~ti~~ 174 (343)
T 2pqm_A 100 FGYRVNIAMPST-MSVERQMIMKAFGA---ELILTEGKKGMPGAIEEVNKMIKEN-PGKYFVANQFGNPDNTAAHHYTAN 174 (343)
T ss_dssp HTCCEEEEEETT-SCHHHHHHHHHTTC---EEEEECGGGHHHHHHHHHHHHHHHS-TTTEEECCTTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCH-HHHHHHHHCCCCCC---CCCCCCCCCCCCHHHHHHHHHCCCC-CCCEEECCCCCCHHHHHHHHHHHH
T ss_conf 099732467601-13667530113575---5222456677407899887621468-981796576776568999999999
Q ss_pred HHHHHHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCCC-CHHHHHHHCCCHHCCCCCCCCCCCCCCCCH
Q ss_conf 9998744778873899634657887886677-75089877058723676-335677532220102345565642001340
Q gi|254780465|r 236 VSSIALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNEN-DTLVRMFDMGMYRPEIVMETTSPAMDIQIP 313 (469)
Q Consensus 236 ~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~N-diL~rf~~tG~y~~~~~~~T~SpsMDI~v~ 313 (469)
...-|+. +++-.+++|.|+-|++.+-+.+ +.++-.+ +++.+.-.. ..+ .|.......+....++. +|
T Consensus 175 EI~eql~--~~~D~vv~~vG~Gg~~~Gi~~~l~~~~~~~-~v~~vep~~~~~~-----~~~~~~~~~i~~~g~~~---~~ 243 (343)
T 2pqm_A 175 EIWEDTD--GEVDIVVSAVGTSGTVIGVAEKLKEKKKGI-KIIAVEPEESAVL-----EGKAKGPHGIQGIGAGF---IP 243 (343)
T ss_dssp HHHHHTT--TCEEEEEEECSSSHHHHHHHHHHHHHCTTC-EEEEEEEGGGCTT-----TTCCCCCCCCTTCCCSS---CC
T ss_pred HHHHHCC--CCCCEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEECCCCCCCC-----CCCCCCCCEECCCCCCC---CC
T ss_conf 9999759--998889958888713899999999878876-0687646886201-----47887897623778986---62
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH
Q ss_conf 13788999870970899999987520265105520221100012134213889999999999986395983833999999
Q gi|254780465|r 314 SNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHA 393 (469)
Q Consensus 314 SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~a 393 (469)
.++.+ .. .-....|+|+|...+++.++++.|+++-|-+++++.|
T Consensus 244 ~~~~~----------------------------------~~--~~~~~~Vsd~ea~~a~~~l~~~eGi~~g~ssgaa~~a 287 (343)
T 2pqm_A 244 DIYKK----------------------------------EF--VDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILA 287 (343)
T ss_dssp TTCCG----------------------------------GG--CCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHH
T ss_pred HHHHH----------------------------------HH--CCCEEEECHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
T ss_conf 88875----------------------------------30--6730477689999999999998098982788999999
Q ss_pred HHHHH---HCCCCCEEEEECCCCCCCHHH
Q ss_conf 99987---479983999971884349888
Q gi|254780465|r 394 ALACR---KSSSTPMVTLATAHPSKFPDT 419 (469)
Q Consensus 394 a~~~~---~~~~~p~VvLATAHPaKFpe~ 419 (469)
+.+.- ..++..+|++.|-+.-|.-++
T Consensus 288 a~~~~~~~~~~~~~VV~il~d~G~kY~st 316 (343)
T 2pqm_A 288 GLKEAEKPENEGKTIVIIVPSCGERYLST 316 (343)
T ss_dssp HHHHHTSGGGTTCEEEEEECBBGGGGTTS
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf 99996030189697999976798422588