HHsearch results for GI: 254780465 and protein with PDBid: 2pqm_A

>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica hm-1} PDB: 3bm5_A*
Probab=99.53  E-value=1.8e-12  Score=105.38  Aligned_cols=275  Identities=17%  Similarity=0.109  Sum_probs=162.5

Q ss_pred             CEEEECC---C--------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf             6047724---8--------82546621389812068238889999999973179--820799716654046799986166
Q gi|254780465|r   89 TPLIQLN---A--------NEFLLELFHGPTLSFKDIAMQFIAELMDHILEERD--HYITIVGATSGDTGAAAIKAFAGK  155 (469)
Q Consensus        89 ~pl~~l~---~--------~~~vlELfHGPT~aFKD~a~q~l~~~~~~~l~~~~--~~~~il~ATSGDTGsAa~~a~~~~  155 (469)
                      +||.++.   +        +.|+=-=++-||+||||.++..   ++..+++...  ...+|++||||.+|.|.+.+.+ .
T Consensus        24 TPLi~l~~l~~~~~~~~g~~iy~K~E~~nPtGSfKdR~A~~---~i~~a~~~g~~~~g~~vv~aSsGN~g~alA~~a~-~   99 (343)
T 2pqm_A           24 TPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFN---IVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGA-V   99 (343)
T ss_dssp             CCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHH---HHHHHHHHTSSCTTCEEEEECSSHHHHHHHHHHH-H
T ss_pred             CCCEECCCCCCHHCCCCCCEEEEEECCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH-H
T ss_conf             95068633240118777988999966889877789999999---9999996485589978999467526899999999-8


Q ss_pred             CCCEEEEECCCCCCCHHHHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCHHHHH
Q ss_conf             78559997357767603321311344787089971796588899999975015431358311345565444011055899
Q gi|254780465|r  156 KRINMYILFPEGRISVVQQKQMTTSEASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYF  235 (469)
Q Consensus       156 ~~i~v~vlyP~g~vS~~Q~~qmtt~~~~Nv~~i~v~G~FDDcq~~Vk~~f~D~~~~~~~~l~s~NSIN~~Ril~Q~vyYf  235 (469)
                      .++++.|+-|.. +|+....+|.....   .++.+++..|+.....+..-...+- ....+..-..-|+.++.+|-.-..
T Consensus       100 ~g~~~~iv~p~~-~~~~k~~~l~~~GA---~v~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~g~~ti~~  174 (343)
T 2pqm_A          100 FGYRVNIAMPST-MSVERQMIMKAFGA---ELILTEGKKGMPGAIEEVNKMIKEN-PGKYFVANQFGNPDNTAAHHYTAN  174 (343)
T ss_dssp             HTCCEEEEEETT-SCHHHHHHHHHTTC---EEEEECGGGHHHHHHHHHHHHHHHS-TTTEEECCTTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCH-HHHHHHHHCCCCCC---CCCCCCCCCCCCHHHHHHHHHCCCC-CCCEEECCCCCCHHHHHHHHHHHH
T ss_conf             099732467601-13667530113575---5222456677407899887621468-981796576776568999999999


Q ss_pred             HHHHHHCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCCCEEEEECCCC-CHHHHHHHCCCHHCCCCCCCCCCCCCCCCH
Q ss_conf             9998744778873899634657887886677-75089877058723676-335677532220102345565642001340
Q gi|254780465|r  236 VSSIALGSPNRNISFSVPTGNFGDIFAGYMA-KMMGLPIEKLIIATNEN-DTLVRMFDMGMYRPEIVMETTSPAMDIQIP  313 (469)
Q Consensus       236 ~a~~~~~~~~~~i~f~VPtGNfGni~Ag~~A-k~MGLPI~kli~AtN~N-diL~rf~~tG~y~~~~~~~T~SpsMDI~v~  313 (469)
                      ...-|+.  +++-.+++|.|+-|++.+-+.+ +.++-.+ +++.+.-.. ..+     .|.......+....++.   +|
T Consensus       175 EI~eql~--~~~D~vv~~vG~Gg~~~Gi~~~l~~~~~~~-~v~~vep~~~~~~-----~~~~~~~~~i~~~g~~~---~~  243 (343)
T 2pqm_A          175 EIWEDTD--GEVDIVVSAVGTSGTVIGVAEKLKEKKKGI-KIIAVEPEESAVL-----EGKAKGPHGIQGIGAGF---IP  243 (343)
T ss_dssp             HHHHHTT--TCEEEEEEECSSSHHHHHHHHHHHHHCTTC-EEEEEEEGGGCTT-----TTCCCCCCCCTTCCCSS---CC
T ss_pred             HHHHHCC--CCCCEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEECCCCCCCC-----CCCCCCCCEECCCCCCC---CC
T ss_conf             9999759--998889958888713899999999878876-0687646886201-----47887897623778986---62


Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHH
Q ss_conf             13788999870970899999987520265105520221100012134213889999999999986395983833999999
Q gi|254780465|r  314 SNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFSAKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHA  393 (469)
Q Consensus       314 SNfERllf~l~~~d~~~v~~~m~~l~~~g~~~i~~~~l~~l~~~f~s~svsDeet~~~Ik~~y~~~gyiiDPHTAvG~~a  393 (469)
                      .++.+                                  ..  .-....|+|+|...+++.++++.|+++-|-+++++.|
T Consensus       244 ~~~~~----------------------------------~~--~~~~~~Vsd~ea~~a~~~l~~~eGi~~g~ssgaa~~a  287 (343)
T 2pqm_A          244 DIYKK----------------------------------EF--VDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILA  287 (343)
T ss_dssp             TTCCG----------------------------------GG--CCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHH
T ss_pred             HHHHH----------------------------------HH--CCCEEEECHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
T ss_conf             88875----------------------------------30--6730477689999999999998098982788999999


Q ss_pred             HHHHH---HCCCCCEEEEECCCCCCCHHH
Q ss_conf             99987---479983999971884349888
Q gi|254780465|r  394 ALACR---KSSSTPMVTLATAHPSKFPDT  419 (469)
Q Consensus       394 a~~~~---~~~~~p~VvLATAHPaKFpe~  419 (469)
                      +.+.-   ..++..+|++.|-+.-|.-++
T Consensus       288 a~~~~~~~~~~~~~VV~il~d~G~kY~st  316 (343)
T 2pqm_A          288 GLKEAEKPENEGKTIVIIVPSCGERYLST  316 (343)
T ss_dssp             HHHHHTSGGGTTCEEEEEECBBGGGGTTS
T ss_pred             HHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf             99996030189697999976798422588