RPSBLAST alignment of GI: 254780465 and protein with PDBid: 1vb3
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1 Length = 428
Score = 320 bits (820), Expect = 6e-88
Identities = 148/459 (32%), Positives = 226/459 (49%), Gaps = 36/459 (7%)
Query: 1 MKYISTRNVDLSLGFCDTILSGLATDGGLYIPKYIPRLSEKEIKDLRGLSYQEIALFIFR 60
MK + ++ + + F + GL + GL+ P +P S EI ++ L + + I
Sbjct: 1 MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILS 60
Query: 61 LFIGQEIKSSKLRDIVNRSYHCFRNAAVTPLIQLNANEFLLELFHGPTLSFKDIAMQFIA 120
FIG EI L + V ++ P+ + ++ LELFHGPTL+FKD +F+A
Sbjct: 61 AFIGDEIPQEILEERVRAAFAFPA-----PVANVESDVGCLELFHGPTLAFKDFGGRFMA 115
Query: 121 ELMDHILEERDHYITIVGATSGDTGAAAIKAFAGKKRINMYILFPEGRISVVQQKQMTTS 180
+++ HI D +TI+ ATSGDTGAA AF G + + IL+P G+IS +Q+K T
Sbjct: 116 QMLTHI--AGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCT- 172
Query: 181 EASNINVIAVQSSFDDCQKIVKNLFSDVFFCHSVNLSGINSINWARIMAQIVYYFVSSIA 240
NI +A+ FD CQ +VK F D ++ L+ NSIN +R++AQI YYF +
Sbjct: 173 LGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQ 232
Query: 241 LGSPNRN-ISFSVPTGNFGDIFAGYMAKMMGLPIEKLIIATNENDTLVRMFDMGMYRPEI 299
L RN + SVP+GNFGD+ AG +AK +GLP+++ I ATN NDT+ R G + P+
Sbjct: 233 LPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKA 292
Query: 300 VMETTSPAMDIQIPSNFERLLFEISGRNSLLVKEAFYSLENKKYFRIDSEHLQKMSLSFS 359
T S AMD+ P+N+ R+ + + L+ Y +D E Q+
Sbjct: 293 TQATLSNAMDVSQPNNWPRVEEL--------FRRKIWQLKELGYAAVDDETTQQT----- 339
Query: 360 AKRASMEDVNSVIKSVLEKSNYLVDPHTAVGIHAALACRKSSSTPMVTLATAHPSKFPDT 419
L++ Y +PH AV A + L TAHP+KF ++
Sbjct: 340 -------------MRELKELGYTSEPHAAVAYRALRDQLN-PGEYGLFLGTAHPAKFKES 385
Query: 420 VKAASGIVPDCPISLEQMMRRPENCKVMNKNIDEIKKFI 458
V+A G D P L + P + + ++K +
Sbjct: 386 VEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLM 424