HHsearch alignment for GI: 254780466 and conserved domain: COG1743
>COG1743 Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair].
Probab=95.54 E-value=0.017 Score=35.28 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEE---ECC---HHHHHHHHHHHHHCCCCE
Q ss_conf 899999889999999986396872999---834---688899998764057860
Q gi|254780466|r 78 FEAYDAFTRAWLLACRRVLKPNGTLWV---IGS---YHNIFRIGTMLQNLNFWI 125 (375)
Q Consensus 78 ~~~Y~~f~~~wl~e~~RvLK~~Gsi~v---~~~---~~~i~~i~~~l~~~gf~~ 125 (375)
T Consensus 560 ~~~fe~l~~~a~~~~rEll~ddg~lv~y~ahk~~eaW~tl--veA~~Rragl~i 611 (875)
T COG1743 560 VEEFENLFREAFQAVRELLKDDGRLVTYYAHKAPEAWITL--VEAGWRRAGLQI 611 (875)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH--HHHHHHHCCCEE
T ss_conf 9999999999999999863888617999862687531768--888875256403