HHsearch alignment for GI: 254780466 and conserved domain: PRK01747
>PRK01747 mnmC 5-methylaminomethyl-2-thiouridine methyltransferase; Reviewed.
Probab=90.85 E-value=0.6 Score=25.91 Aligned_cols=74 Identities=22% Similarity=0.272 Sum_probs=51.6
Q ss_pred CEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 08517259989728414711898477876155871333678513001344357789899999889999999986396872
Q gi|254780466|r 22 KIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRVLKPNGT 101 (375)
Q Consensus 22 kI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~RvLK~~Gs 101 (375)
T Consensus 145 ~l~~gd~~~~l~~l-~~~~Daw~lDg---------------------------F~P~~np~mW~~~~~~~~~~~~~~~~~ 196 (660)
T PRK01747 145 DLWFGDILELLPQL-DARADAWFLDG---------------------------FAPAKNPDMWSPNLFNALARLARPGAT 196 (660)
T ss_pred EEEECCHHHHHHHC-CCCCCEEEECC---------------------------CCCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf 99966599988745-10111898438---------------------------785558230688999999997289975
Q ss_pred EEEECCHHHHHHHHHHHHHCCCCEE
Q ss_conf 9998346888999987640578601
Q gi|254780466|r 102 LWVIGSYHNIFRIGTMLQNLNFWIL 126 (375)
Q Consensus 102 i~v~~~~~~i~~i~~~l~~~gf~~~ 126 (375)
T Consensus 197 ~~T~t---aag~Vrr~L~~~GF~v~ 218 (660)
T PRK01747 197 LATFT---SAGFVRRGLQEAGFTVK 218 (660)
T ss_pred EEEEC---CHHHHHHHHHHCCCEEE
T ss_conf 88630---45899999997896698