HHsearch alignment for GI: 254780466 and conserved domain: PRK10909
>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional.
Probab=97.05 E-value=0.001 Score=42.78 Aligned_cols=57 Identities=19% Similarity=0.416 Sum_probs=38.8
Q ss_pred CCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 70851725998972841471189847787615587133367851300134435778989999988999999998639687
Q gi|254780466|r 21 DKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRVLKPNG 100 (375)
Q Consensus 21 nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~RvLK~~G 100 (375)
T Consensus 103 ~~ii~~da~~~L~~~-~~~fDlIF~DPPY~~---------------------------~~~~~~l~--~l~~~~~L~~~g 152 (198)
T PRK10909 103 ARVVNTNALSFLAQP-GTPHNVVFVDPPFRK---------------------------GLLEETIN--LLEQNGWLADDA 152 (198)
T ss_pred EEEEEHHHHHHHHCC-CCCEEEEEECCCCCC---------------------------CHHHHHHH--HHHHCCCCCCCC
T ss_conf 799955699986255-995218998999765---------------------------55999999--999888918996
Q ss_pred EEEEECC
Q ss_conf 2999834
Q gi|254780466|r 101 TLWVIGS 107 (375)
Q Consensus 101 si~v~~~ 107 (375)
T Consensus 153 liiiE~~ 159 (198)
T PRK10909 153 LIYVESE 159 (198)
T ss_pred EEEEEEC
T ss_conf 9999954