HHsearch alignment for GI: 254780466 and conserved domain: PRK10909

>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional.
Probab=97.05  E-value=0.001  Score=42.78  Aligned_cols=57  Identities=19%  Similarity=0.416  Sum_probs=38.8

Q ss_pred             CCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             70851725998972841471189847787615587133367851300134435778989999988999999998639687
Q gi|254780466|r   21 DKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRVLKPNG  100 (375)
Q Consensus        21 nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~RvLK~~G  100 (375)
T Consensus       103 ~~ii~~da~~~L~~~-~~~fDlIF~DPPY~~---------------------------~~~~~~l~--~l~~~~~L~~~g  152 (198)
T PRK10909        103 ARVVNTNALSFLAQP-GTPHNVVFVDPPFRK---------------------------GLLEETIN--LLEQNGWLADDA  152 (198)
T ss_pred             EEEEEHHHHHHHHCC-CCCEEEEEECCCCCC---------------------------CHHHHHHH--HHHHCCCCCCCC
T ss_conf             799955699986255-995218998999765---------------------------55999999--999888918996


Q ss_pred             EEEEECC
Q ss_conf             2999834
Q gi|254780466|r  101 TLWVIGS  107 (375)
Q Consensus       101 si~v~~~  107 (375)
T Consensus       153 liiiE~~  159 (198)
T PRK10909        153 LIYVESE  159 (198)
T ss_pred             EEEEEEC
T ss_conf             9999954