HHsearch alignment for GI: 254780466 and conserved domain: TIGR03533
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=93.72 E-value=0.24 Score=28.37 Aligned_cols=91 Identities=25% Similarity=0.380 Sum_probs=59.7
Q ss_pred CEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCC------EECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 08517259989728414711898477876155871------333678513001344357789899999889999999986
Q gi|254780466|r 22 KIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQ------LYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRV 95 (375)
Q Consensus 22 kI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~------~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~Rv 95 (375)
T Consensus 175 ~~~~~D~~~---~~~~~~fDlIVSNPPYI~~~e~~~l~~ev~~EP~~AL~-----------gG~dGL~~yr~Ii~~a~~~ 240 (284)
T TIGR03533 175 TLIQSDLFA---ALPGRKYDLIVSNPPYVDAEDMADLPAEYHHEPELALA-----------SGEDGLDLVRRILAEAADH 240 (284)
T ss_pred EEEECCHHH---HCCCCCCCEEEECCCCCCHHHHHHCCHHHCCCCHHHHC-----------CCCCHHHHHHHHHHHHHHH
T ss_conf 888351433---14577778799779978846554497641158699875-----------8955879999999988984
Q ss_pred CCCCCEEEE-ECCHHHHHHHHHHHHHCCCCEEEEEEEECC
Q ss_conf 396872999-834688899998764057860124687315
Q gi|254780466|r 96 LKPNGTLWV-IGSYHNIFRIGTMLQNLNFWILNDIVWRKS 134 (375)
Q Consensus 96 LK~~Gsi~v-~~~~~~i~~i~~~l~~~gf~~~n~IIW~K~ 134 (375)
T Consensus 241 L~pgG~l~lEiG~~Q--~~~~~~~~~~~~------~~~~~ 272 (284)
T TIGR03533 241 LNENGVLVVEVGNSM--EALEEAYPDVPF------TWLEF 272 (284)
T ss_pred CCCCCEEEEEECCCH--HHHHHHCCCCCC------EEEEE
T ss_conf 256978999979788--999986689996------47741