HHsearch alignment for GI: 254780466 and conserved domain: pfam03602

Probab=96.52  E-value=0.0061  Score=38.03  Aligned_cols=61  Identities=23%  Similarity=0.370  Sum_probs=38.3

Q ss_pred             HHCCCEECCCHHHHHHHCC--CCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             5327085172599897284--14711898477876155871333678513001344357789899999889999999986
Q gi|254780466|r   18 EWKDKIIKGNSISVLEKLP--AKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRV   95 (375)
Q Consensus        18 ~~~nkI~~GDcl~~l~~Lp--d~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~Rv   95 (375)
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~fdiIF~DPPY~~---------------------------~~~~~~-l~~l~-~~~~  140 (181)
T pfam03602        90 GLEGAVLRMDAARALLRLAGKGPPFDLVFLDPPYAK---------------------------GLIEEA-LELLA-EKGW  140 (181)
T ss_pred             CCCCEEEECCHHHHHHHHCCCCCCCCEEECCCCCCC---------------------------HHHHHH-HHHHH-HCCC
T ss_conf             899779981089999875335788876635997542---------------------------069999-99999-6666


Q ss_pred             CCCCCEEEEECC
Q ss_conf             396872999834
Q gi|254780466|r   96 LKPNGTLWVIGS  107 (375)
Q Consensus        96 LK~~Gsi~v~~~  107 (375)
T Consensus       141 l~~~~iiiiE~~  152 (181)
T pfam03602       141 LNPNALIVVETE  152 (181)
T ss_pred             CCCCEEEEEEEC
T ss_conf             579809999966