HHsearch results for GI: 254780466 and protein with PDBid: 1boo_A
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=100.00 E-value=0 Score=364.63 Aligned_cols=262 Identities=22% Similarity=0.327 Sum_probs=185.4
Q ss_pred CCCCHHHHCCCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 32433553270851725998972841471189847787615587133367851300134435778989999988999999
Q gi|254780466|r 12 NQNSIFEWKDKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLA 91 (375)
Q Consensus 12 ~~~~~~~~~nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e 91 (375)
+..-...-.|+||+|||+++|+.||++||||||||||||++.++.. + ..+..+|++|+.+|+.+
T Consensus 6 ~~~~~~~~~~~l~~GD~l~~l~~L~~~sVdlIytDPPYn~~~~~~~---------------~-~~~~~~y~~~~~~~~~~ 69 (323)
T 1boo_A 6 KKPAYTTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEY---------------G-NLEQHEYVDWFLSFAKV 69 (323)
T ss_dssp SCCSEECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSS---------------C-SCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCCCCC---------------C-CCCHHHHHHHHHHHHHH
T ss_conf 7863008998699662899986270489798998999857776778---------------9-98999999999999999
Q ss_pred HHHHCCCCCEEEEECCH-----------HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC------CCCCCCCCHHHHHH
Q ss_conf 99863968729998346-----------88899998764057860124687315677775------77517654021322
Q gi|254780466|r 92 CRRVLKPNGTLWVIGSY-----------HNIFRIGTMLQNLNFWILNDIVWRKSNPMPNF------RGRRFQNAHETLIW 154 (375)
Q Consensus 92 ~~RvLK~~Gsi~v~~~~-----------~~i~~i~~~l~~~gf~~~n~IIW~K~n~~pn~------~g~r~~~~hE~iiw 154 (375)
++|+||++|+++++++. +..+.....+...|+.+...++|.+.++++.. ....+..++|.++|
T Consensus 70 ~~rvLk~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (323)
T 1boo_A 70 VNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWFNPSKLPSPIEWVNKRKIRVKDAVNTVWW 149 (323)
T ss_dssp HHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHHTTCCEEEEEEEEECSSCTTSCTCCCCCTCCSCCCCEEEEEE
T ss_pred HHHHCCCCCCEEECCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99854657864422420221265411002367787777624857731256624778764221235445544445442465
Q ss_pred HHCCCCCCCCEECCCCCCC---------CCCCEEEC-------------------------CCCCCCCCCCCCC---CCC
Q ss_conf 1005666650234100112---------37980104-------------------------6542210258541---457
Q gi|254780466|r 155 ASPSPKAKGYTFNYDALKA---------ANEDVQMR-------------------------SDWLIPICSGSER---LRN 197 (375)
Q Consensus 155 ~~K~~~~k~y~fny~~~k~---------~n~~~~~~-------------------------s~w~~pi~~g~er---~k~ 197 (375)
..++.... ++...... .......+ +.+.+........ ...
T Consensus 150 ~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (323)
T 1boo_A 150 FSKTEWPK---SDITKVLAPYSDRMKKLIEDPDKFYTPKTRPSGHDIGKSFSKDNGGSIPPNLLQISNSESNGQYLANCK 226 (323)
T ss_dssp EESSSSCC---CCGGGSCC--------------------------------------CCCCSEEECCSCSCCHHHHHHHH
T ss_pred ECCCCCCC---CCCCCCCCCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 13555445---664333443220010012456302146566554554540233457765544433455677741332123
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCCHHHHC
Q ss_conf 78753368778189999999852899888998688851799999980981699972899999999999630568765630
Q gi|254780466|r 198 KDGEKLHPTQKPEALLSRILVSSTKPGDIILDPFFGSGTSGAVAKKLRRSFIGIEMKQDYIDIATKRIASVQPLGNIELT 277 (375)
Q Consensus 198 ~~g~k~HPTqKP~~LleriI~~~S~~gDiVLDPF~GSGTT~~aA~~lgR~~IGiE~~~~Y~~~a~~Rl~~~~~~~~~~~~ 277 (375)
..+.+.||||||++|++|||+++|+|||+|||||||||||++||++|||+|||||++++|+++|.+||++......+.+.
T Consensus 227 ~~~~~~hpt~KP~~L~~~lI~~~s~~gdiVLDpF~GSGTT~~aa~~lgR~~Ig~El~~~y~~~a~~Rl~~~~~~~~~~~~ 306 (323)
T 1boo_A 227 LMGIKAHPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITD 306 (323)
T ss_dssp HTTCCCCSSCCCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCSCHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHEEEECCCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 45676677767715542311131799999997999986899999981992899978999999999998764312899999
Q ss_pred CCCCCCCCCCCCHHH
Q ss_conf 244433377552346
Q gi|254780466|r 278 VLTGKRTEPRVAFNL 292 (375)
Q Consensus 278 ~~~~~~~~~rvpfg~ 292 (375)
.....+......|.+
T Consensus 307 ~~~~~~~~~~~~~~~ 321 (323)
T 1boo_A 307 IYNRILNGESLDLNS 321 (323)
T ss_dssp HHHHHHTTCCEETTC
T ss_pred HHHHHCCCCCCCCCC
T ss_conf 999751555578012