HHsearch results for GI: 254780466 and protein with PDBid: 1ne2_A

>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32

Probab=97.80  E-value=6.3e-05  Score=48.76  Aligned_cols=65  Identities=20%  Similarity=0.264  Sum_probs=50.4

Q ss_pred             CCCCCCHHHHHHHHH----HCCCCCCEEEECCCCCHHHHHHHHHHC-CEEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf             687781899999998----528998889986888517999999809-8169997289999999999963056
Q gi|254780466|r  204 HPTQKPEALLSRILV----SSTKPGDIILDPFFGSGTSGAVAKKLR-RSFIGIEMKQDYIDIATKRIASVQP  270 (375)
Q Consensus       204 HPTqKP~~LleriI~----~~S~~gDiVLDPF~GSGTT~~aA~~lg-R~~IGiE~~~~Y~~~a~~Rl~~~~~  270 (375)
                      |+|  |-.+..+++.    .-.-+|..|||++||||.-+++|..+| ++-+|+|+|++.++.|++.+.++.-
T Consensus        30 Y~t--~~~iaa~~~~~~~~~gd~~Gk~VLDlGcGtG~l~i~a~~~ga~~V~~vDid~~a~~~a~~N~~~~~~   99 (200)
T 1ne2_A           30 YPT--DASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNF   99 (200)
T ss_dssp             CCC--CHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEE
T ss_pred             CCC--CHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf             799--8899999999998669989398998757510999999967998796750899999999998985785