HHsearch results for GI: 254780466 and protein with PDBid: 1uwv_A
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.35 E-value=0.00062 Score=42.72 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHCC-CCCCEEEECCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf 1899999998528-9988899868885179999998098169997289999999999963
Q gi|254780466|r 209 PEALLSRILVSST-KPGDIILDPFFGSGTSGAVAKKLRRSFIGIEMKQDYIDIATKRIAS 267 (375)
Q Consensus 209 P~~LleriI~~~S-~~gDiVLDPF~GSGTT~~aA~~lgR~~IGiE~~~~Y~~~a~~Rl~~ 267 (375)
.+.|.+.++.... .+++.|+|-|||+||.+....+...+-+|+|.++..++.|++-.+.
T Consensus 271 ~~~l~~~v~~~l~~~~~~~vlDLYcG~G~fsl~La~~~~~V~gvE~~~~Av~~A~~na~~ 330 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARL 330 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 999999999984456887799956885177787665056245663549999999999998