HHsearch results for GI: 254780466 and protein with PDBid: 2ih2_A
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.52 E-value=2.6e-05 Score=51.09 Aligned_cols=77 Identities=29% Similarity=0.459 Sum_probs=40.7
Q ss_pred CCCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCC----C-CCHHHHHHHHHHHHHHHHH
Q ss_conf 2708517259989728414711898477876155871333678513001344357----7-8989999988999999998
Q gi|254780466|r 20 KDKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDK----F-SSFEAYDAFTRAWLLACRR 94 (375)
Q Consensus 20 ~nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~----~-~s~~~Y~~f~~~wl~e~~R 94 (375)
++.|++||.+. .-+.+.+|+|++.|||............... ...+.|.+ . ...+-|.- ++..+.+
T Consensus 82 ~~~i~~~D~l~---~~~~~~fD~VigNPPy~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dl~~~----Fi~~~l~ 152 (421)
T 2ih2_A 82 WAEGILADFLL---WEPGEAFDLILGNPPYGIVGEASKYPIHVFK--AVKDLYKKAFSTWKGKYNLYGA----FLEKAVR 152 (421)
T ss_dssp TEEEEESCGGG---CCCSSCEEEEEECCCCCCBSCTTTCSBCCCH--HHHHHHHHHCTTCCTTCCHHHH----HHHHHHH
T ss_pred HHHHHHCCCCC---CCCCCCCCEEEECCCCCCCCCCCCCCHHHHH--HHHHHHCCCCCCCCCCCHHHHH----HHHHHHH
T ss_conf 74277377333---6854577778725765544545544212333--3222220135678996539999----9999999
Q ss_pred HCCCCCEEEEE
Q ss_conf 63968729998
Q gi|254780466|r 95 VLKPNGTLWVI 105 (375)
Q Consensus 95 vLK~~Gsi~v~ 105 (375)
.||++|.+-++
T Consensus 153 ~lk~~G~~~~I 163 (421)
T 2ih2_A 153 LLKPGGVLVFV 163 (421)
T ss_dssp HEEEEEEEEEE
T ss_pred HCCCCCCEEEE
T ss_conf 63778818999