HHsearch results for GI: 254780466 and protein with PDBid: 2o07_A
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A*
Probab=94.65 E-value=0.026 Score=32.83 Aligned_cols=107 Identities=18% Similarity=0.277 Sum_probs=61.9
Q ss_pred HHHHCCCEECCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 35532708517259989728414711898477876155871333678513001344357789899999889999999986
Q gi|254780466|r 16 IFEWKDKIIKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDAFTRAWLLACRRV 95 (375)
Q Consensus 16 ~~~~~nkI~~GDcl~~l~~Lpd~sVDlI~tDPPYni~~~~~~~~~~~s~~~~~~d~wd~~~s~~~Y~~f~~~wl~e~~Rv 95 (375)
..+-+-+|+.+|+.+.|+.- +++.|+|+.|++-..+ ....-|+.+++..|+|.
T Consensus 146 ~~dpRv~i~~~Da~~~l~~~-~~~yDvIi~D~~dp~~--------------------------~~~~L~t~eFy~~~~~~ 198 (304)
T 2o07_A 146 YSSSKLTLHVGDGFEFMKQN-QDAFDVIITDSSDPMG--------------------------PAESLFKESYYQLMKTA 198 (304)
T ss_dssp GGCTTEEEEESCHHHHHHTC-SSCEEEEEEECC-------------------------------------CHHHHHHHHH
T ss_pred CCCCCEEEEEHHHHHHHHHC-CCCCCEEEECCCCCCC--------------------------HHHHHCCHHHHHHHHHH
T ss_conf 35772489960799999747-7778889990899886--------------------------35765379999999997
Q ss_pred CCCCCEEEEECC-H----HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 396872999834-6----888999987640578601246873156777757751765402132210056
Q gi|254780466|r 96 LKPNGTLWVIGS-Y----HNIFRIGTMLQNLNFWILNDIVWRKSNPMPNFRGRRFQNAHETLIWASPSP 159 (375)
Q Consensus 96 LK~~Gsi~v~~~-~----~~i~~i~~~l~~~gf~~~n~IIW~K~n~~pn~~g~r~~~~hE~iiw~~K~~ 159 (375)
|+++|.+.+.+. . ..+-.+...++.+ |.... -....+|.+-+.. =..++++|..
T Consensus 199 L~~~Gv~v~q~~s~~~~~~~~~~i~~~l~~~-F~~v~----~y~~~vPsy~~g~-----w~f~~aSk~~ 257 (304)
T 2o07_A 199 LKEDGVLCCQGECQWLHLDLIKEMRQFCQSL-FPVVA----YAYCTIPTYPSGQ-----IGFMLCSKNP 257 (304)
T ss_dssp EEEEEEEEEEEECTTTCHHHHHHHHHHHHHH-CSEEE----EEEEECTTSGGGE-----EEEEEEESST
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHH-CCCEE----EEEEEEEEECCHH-----CEEEEEECCC
T ss_conf 5999899990898100699999999999974-89526----8998988865701-----3879989985