HHsearch results for GI: 254780466 and protein with PDBid: 3id6_C
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O- methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, RNA-binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} PDB: 3id5_B*
Probab=95.38 E-value=0.048 Score=31.26 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=41.1
Q ss_pred CCCCCCEEEECCCCCHHHH-HHHHHHC--CEEEEEEECHHHHHHHHHHHHHCC
Q ss_conf 2899888998688851799-9999809--816999728999999999996305
Q gi|254780466|r 220 STKPGDIILDPFFGSGTSG-AVAKKLR--RSFIGIEMKQDYIDIATKRIASVQ 269 (375)
Q Consensus 220 ~S~~gDiVLDPF~GSGTT~-~aA~~lg--R~~IGiE~~~~Y~~~a~~Rl~~~~ 269 (375)
.-+||+.|||-=||||||. .+|...| =+-+|+|+++..++.+.++.++..
T Consensus 73 ~lkpG~~VLdLG~G~G~~~~~la~~Vg~~G~V~aVD~s~~~l~~a~~~a~~~~ 125 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP 125 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 88999999996771889999999971568769999799999999997656546