HHsearch results for GI: 254780466 and protein with PDBid: 3k0b_A
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structural genomics; 1.50A {Listeria monocytogenes str}
Probab=98.35 E-value=1.1e-06 Score=59.49 Aligned_cols=68 Identities=21% Similarity=0.308 Sum_probs=56.5
Q ss_pred CCCCCCCHHHHHHHHHHCC-CCCCEEEECCCCCHHHHHHHHHH-------------------------------------
Q ss_conf 3687781899999998528-99888998688851799999980-------------------------------------
Q gi|254780466|r 203 LHPTQKPEALLSRILVSST-KPGDIILDPFFGSGTSGAVAKKL------------------------------------- 244 (375)
Q Consensus 203 ~HPTqKP~~LleriI~~~S-~~gDiVLDPF~GSGTT~~aA~~l------------------------------------- 244 (375)
.|+++--+.|..=++..+. ++++.++||||||||-++-|..+
T Consensus 180 ~~~ApLrEtLAaalL~la~~~~~~~llDPmCGSGTilIEAAl~a~~~~pg~~R~f~f~~~~~~~~~~w~~~~~~a~~~~~ 259 (393)
T 3k0b_A 180 QGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLAN 259 (393)
T ss_dssp SCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_conf 78888758999999997377899833067899667999999997387888662435442246899999999999875430
Q ss_pred ---CCEEEEEEECHHHHHHHHHHHHHCCC
Q ss_conf ---98169997289999999999963056
Q gi|254780466|r 245 ---RRSFIGIEMKQDYIDIATKRIASVQP 270 (375)
Q Consensus 245 ---gR~~IGiE~~~~Y~~~a~~Rl~~~~~ 270 (375)
.-++||.|+|+..++.|+.-+++.--
T Consensus 260 ~~~~~~i~g~D~d~~ai~~a~~N~~~ag~ 288 (393)
T 3k0b_A 260 YDQPLNIIGGDIDARLIEIAKQNAVEAGL 288 (393)
T ss_dssp TTCCCCEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 58876389995989999999999997387