HHsearch results for GI: 254780466 and protein with PDBid: 3ocj_A

>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}

Probab=96.08  E-value=0.011  Score=35.23  Aligned_cols=59  Identities=19%  Similarity=0.193  Sum_probs=46.3

Q ss_pred             HHHHHHHHHCCCCCCEEEECCCCCHHHHHHH-HHH--CCEEEEEEECHHHHHHHHHHHHHCC
Q ss_conf             9999999852899888998688851799999-980--9816999728999999999996305
Q gi|254780466|r  211 ALLSRILVSSTKPGDIILDPFFGSGTSGAVA-KKL--RRSFIGIEMKQDYIDIATKRIASVQ  269 (375)
Q Consensus       211 ~LleriI~~~S~~gDiVLDPF~GSGTT~~aA-~~l--gR~~IGiE~~~~Y~~~a~~Rl~~~~  269 (375)
                      +++.+.+...-.+|..|||-=||||..+.+. ...  +-+.+|+|++++.++.|++++.+..
T Consensus       106 ~~~~~~~~~~l~~g~~vLDvGcG~G~~~~~l~~~~~p~~~v~gvD~S~~~l~~A~~~~~~~~  167 (305)
T 3ocj_A          106 GHFRRALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA  167 (305)
T ss_dssp             HHHHHHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST
T ss_pred             HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHC
T ss_conf             99999999409995999994474769999999971899589999798889999975302201