PSIBLAST alignment of GI: 254780466 and protein with PDB id: 1boo
>gi|6729995|pdb|1BOO|A Chain A, Pvuii Dna Methyltransferase (Cytosine-N4-Specific) Length = 323
Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/293 (20%), Positives = 103/293 (35%), Gaps = 67/293 (22%)
Query: 24 IKGNSISVLEKLPAKSVDLIFADPPYNLQLNGQLYRPDHSLVDAVTDSWDKFSSFEAYDA 83
G+S+ +LE P +S+ L+ PP+ LQ + + Y
Sbjct: 18 YIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQ----------------HEYVD 61
Query: 84 FTRAWLLACRRVLKPNGTLWVIG-----------SYHNIFRIGTMLQNLNFWILNDIVWR 132
+ ++ + LKP+G+ V S +N + M+ + F++ D W
Sbjct: 62 WFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWF 121
Query: 133 KSNPMP------NFRGRRFQNAHETLIWASPSPKAK--------GYTFNYDALKAANEDV 178
+ +P N R R ++A T+ W S + K Y+ L +
Sbjct: 122 NPSKLPSPIEWVNKRKIRVKDAVNTVWWFSKTEWPKSDITKVLAPYSDRMKKLIEDPDKF 181
Query: 179 QMRSDWLIPICSGSERLRNKDGE--------------------------KLHPTQKPEAL 212
G ++ G K HP + P L
Sbjct: 182 YTPKTRPSGHDIGKSFSKDNGGSIPPNLLQISNSESNGQYLANCKLMGIKAHPARFPAKL 241
Query: 213 LSRILVSSTKPGDIILDPFFGSGTSGAVAKKLRRSFIGIEMKQDYIDIATKRI 265
+ T+P D+++D F GS T+G VA++ R +I EMK +Y+ + R
Sbjct: 242 PEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRF 294