HHSEARCH alignment of GI: 254780467 and SCOP domain: d1vp7a_

Alignment

Probab=99.58  E-value=3.6e-15  Score=117.80  Aligned_cols=60  Identities=32%  Similarity=0.571  Sum_probs=57.0

Q ss_pred             HCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             289999999999999998779999999999999999999999999999999999998315
Q gi|254780467|r   13 HLPFEEAVSELENIIAKLERGDVTLDESISIYERGEALKSHCEFLLCSAEKRIEQIKLNR   72 (86)
Q Consensus        13 ~~sfEea~~~Le~Iv~~LE~g~l~Lees~~~ye~G~~L~~~C~~~L~~ae~ki~~l~~~~   72 (86)
                      ..|||++|.+||+||++||+|++|||+|+++|++|++|+++|+++|+.|++||++|..+.
T Consensus         5 p~sfEe~l~~LE~IV~~LE~g~l~Leesl~~ye~G~~L~~~C~~~L~~ae~ki~~l~~~~   64 (68)
T d1vp7a_           5 PQDFETALAELESLVSAMENGTLPLEQSLSAYRRGVELARVCQDRLAQAEQQVKVLEGDL   64 (68)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             979999999999999998679998999999999999999999999999999999997256

SCOP domain information

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: XseB-like
family: XseB-like
domain: Exonuclease VII small subunit XseB
species: Bordetella pertussis [TaxId: 520]