HHsearch alignment for GI: 254780468 and conserved domain: PRK09581
>PRK09581 pleD response regulator PleD; Reviewed.
Probab=100.00 E-value=4.6e-36 Score=307.88 Aligned_cols=167 Identities=30% Similarity=0.494 Sum_probs=151.1
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 23216630677532406699999999999987553389848999997678579888427788999999999999983489
Q gi|254780468|r 526 LEGILCNAFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSLTRRIGELLKF 605 (963)
Q Consensus 526 ~~~l~~~a~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~ia~~L~~~~~~ 605 (963)
T Consensus 285 ~~~~~~lA~~D~LTgL~NR~~f~~~L~~~~~~a~r~~~-~~all~lDlD~FK~INDt~GH~~GD~lL~~vA~rL~~~~R~ 363 (457)
T PRK09581 285 LEQSIEMAVTDGLTGLHNRRYFDMHLKQLIERANERGK-PLSLMMLDIDHFKQVNDTYGHDAGDEVLREFAKRLRKNIRG 363 (457)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999873658766713199999999999999997599-38999998877428887669537799999999999987698
Q ss_pred CCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHH-CEEEECC--EEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 9769998064102025566998999998765554310-1155254--679999998776458988998999999999999
Q gi|254780468|r 606 PDILARLSGNRFGIILISENNSLKIADFAIAMRKSIA-MPINLLE--REITVTASIGFASWTSSKITSSEMLKNAELAMY 682 (963)
Q Consensus 606 ~~~laR~~gdeFaill~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~i~~t~siGi~~~~~~~~~~~~ll~~Ad~Al~ 682 (963)
T Consensus 364 ~D~vaR~GGDEF~ilL~~~-~~~~a~~vaeri~~~i~~~pf~~~~~~~~i~vT~SiGia~~~~~~~~~~~Ll~~AD~AmY 442 (457)
T PRK09581 364 TDLIARYGGEEFVVVMPDT-DIEVAIAVAERIRRKIAEEPFAISDGKERLNVTVSIGVAELRPSGESIEALIKRADKALY 442 (457)
T ss_pred CCEEEEECCEEEEEEECCC-CHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 7799961570689997899-999999999999999974794554898899999999999747998989999999999999
Q ss_pred HHHHHCCCCEEE
Q ss_conf 998708974052
Q gi|254780468|r 683 HAKHRGGNHVES 694 (963)
Q Consensus 683 ~Ak~~g~~~~~~ 694 (963)
T Consensus 443 ~AK~~GRNrVv~ 454 (457)
T PRK09581 443 EAKNTGRNRVVA 454 (457)
T ss_pred HHHHHCCCEEEE
T ss_conf 999629996996