HHsearch alignment for GI: 254780468 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=100.00 E-value=0 Score=987.78 Aligned_cols=550 Identities=23% Similarity=0.331 Sum_probs=474.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCC
Q ss_conf 88899974888999998325938999987997899988899762899778338978988626976899999999999607
Q gi|254780468|r 395 YFSQGIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGY 474 (963)
Q Consensus 395 ~~~~~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~ 474 (963)
T Consensus 421 ~aE~~lr~l~erl~la~ea~~iGiwe~d~~~~~i~~~~r~~~l~g~~~~-~~~~~~~w~~~ihPdD~~~v~~~~~~~l~~ 499 (1116)
T PRK09776 421 RTEQVNERLMERITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPH-IKPNWQVWYACLHPEDRQRVEKEIRDALQG 499 (1116)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCHHHHHHHCCCCC-CCCCHHHHHHHCCHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999862476635520566502113789998488822-266889998723915689999999999715
Q ss_pred CCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHH-----------------------------
Q ss_conf 897389999998699968999872267687999889999999853057731-----------------------------
Q gi|254780468|r 475 RRGRLQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKS----------------------------- 525 (963)
Q Consensus 475 ~~~~~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~----------------------------- 525 (963)
T Consensus 500 ~~-~~d~E~Rl~~~dG~~r~i~~~a~~~~d~~G~~~r~~G~~~DITe~K~~eeaL~e~~erl~~~l~si~d~vi~tD~~~ 578 (1116)
T PRK09776 500 RS-PFKLEFRIVVPDGEIRHIRALANRVLNKDGEVERLLGINMDMTEVRQLNEALFEEKERLHITLDSIGEAVVCTDAAM 578 (1116)
T ss_pred CC-CCCCEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 88-75604678847997899986214898689988988731323207789999999999999999834022489973788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780468|r 526 -------------------------------------------------------------------------------- 525 (963)
Q Consensus 526 -------------------------------------------------------------------------------- 525 (963)
T Consensus 579 ri~~~Npaae~~tG~~~~e~~G~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~G~~~~v~~s~~pi~ 658 (1116)
T PRK09776 579 KVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENPVEICLADTSRSYLEQDVVLHSRSGGSYDVQYSIAPLS 658 (1116)
T ss_pred CEEEECHHHHHHHCCCHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCC
T ss_conf 67888699999829887998499878970036644211112199999740787331235368826996899997304513
Q ss_pred ----------------------HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHC
Q ss_conf ----------------------2321663067753240669999999999998755338984899999767857988842
Q gi|254780468|r 526 ----------------------LEGILCNAFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVL 583 (963)
Q Consensus 526 ----------------------~~~l~~~a~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~ 583 (963)
T Consensus 659 ~~~g~~~g~V~v~~Dit~~k~~~~~l~~~A~hD~LTgLpNR~~f~~~L~~~l~~~~~~~~-~~al~~iDlD~Fk~iNd~~ 737 (1116)
T PRK09776 659 TLDGENIGSVLVFQDVTESRAMLRQLSYSASHDALTGLANRASFEKQLREALQTVNSTHQ-RHALVFIDLDRFKAVNDSA 737 (1116)
T ss_pred CCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECHHHHHHHHHC
T ss_conf 477855447985201229999999998754477434866599999999999999986199-2799999813213888702
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHH-CEEEECCEEEEEEEEEEEEE
Q ss_conf 77889999999999999834899769998064102025566998999998765554310-11552546799999987764
Q gi|254780468|r 584 GIAVGDDVLVSLTRRIGELLKFPDILARLSGNRFGIILISENNSLKIADFAIAMRKSIA-MPINLLEREITVTASIGFAS 662 (963)
Q Consensus 584 G~~~gD~lL~~ia~~L~~~~~~~~~laR~~gdeFaill~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~t~siGi~~ 662 (963)
T Consensus 738 Gh~~GD~lL~~~a~rl~~~~~~~d~~aR~ggdeF~ill~~~~-~~~a~~ia~~i~~~i~~~~f~~~~~~~~i~~SiGIa~ 816 (1116)
T PRK09776 738 GHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAINDYRFPWEGRVYRVGASAGITA 816 (1116)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCC-HHHHHHHHHHHHHHHHCCCEEECCEEEEEEEEEEEEE
T ss_conf 871678999999999997679898998315848999966999-7999999999999985788756898999899999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC--HH--HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEE
Q ss_conf 589889989999999999999987089740520111110--68--99999998743641003554114688221442100
Q gi|254780468|r 663 WTSSKITSSEMLKNAELAMYHAKHRGGNHVESFRVSSFR--SD--RVMIKEDLCLAVENSELYLVYHPIIRLMDEEIVGL 738 (963)
Q Consensus 663 ~~~~~~~~~~ll~~Ad~Al~~Ak~~g~~~~~~~~~~~~~--~~--~~~~~~~l~~al~~~~~~l~~QPi~~~~~~~~~~~ 738 (963)
T Consensus 817 ~p~~~~~~~~Ll~~Ad~Amy~AK~~Grn~~~~y~~~~~~~~~~~~~l~l~~~Lr~Al~~~ef~L~yQPiv~~~~~~~~~~ 896 (1116)
T PRK09776 817 IDDNNHQASEVMSQADIACYAAKNAGRGRVTVYEPQQAAAHSERRELSLAEQWRSMLEENQLMLQAQEIASPRIPEARNL 896 (1116)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEE
T ss_conf 17999999999999999999998719994899672568999999999999999999977998999836788698989899
Q ss_pred EHH-CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCHHHHHHHHH
Q ss_conf 000-0003577553023035788897799679989999999999999887158998499997697794391489999999
Q gi|254780468|r 739 EAL-IQWDHPKWGNISSSEFMLIAEELCMIKAINLFMLERIARDIISWRDQANMPPIFILINIASKDLLDNELCEGMQAL 817 (963)
Q Consensus 739 E~l-~R~~~~~~~~i~p~~fi~~ae~~gl~~~ld~~vl~~a~~~l~~~~~~~~~~~~~vsINlS~~~l~~~~f~~~l~~~ 817 (963)
T Consensus 897 eaLllRw~~p~~g~isP~~FIp~AE~~gLI~~ig~WVl~~a~~~~~~~~~---~~~l~vsVNlS~~ql~~~~f~~~l~~~ 973 (1116)
T PRK09776 897 WLISLRLWDCEGEIIDEGAFRPAAEDPALMHALDRWVIHELFQQGARAVA---SKGLSIAIPLSVASLSSATLLPFLLEQ 973 (1116)
T ss_pred EEEEEEEECCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC---CCCCEEEEEECHHHHCCCCHHHHHHHH
T ss_conf 99620239998888688999999875798899999999999999998578---999679999599993899889999999
Q ss_pred HHHCCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCC--CHHH
Q ss_conf 98819995469999713377509998999999999889899991887764548889727998999716885399--9457
Q gi|254780468|r 818 ISKTLYSPSRIKLSFSESVVMGNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGS--TEKR 895 (963)
Q Consensus 818 l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~--~~~~ 895 (963)
T Consensus 974 L~~~~l~p~~L~lEITEs~l~~~~~~~~~~l~~Lr~lGi~ialDDFGTGySSL~yLk~lPvD~LKID~sFV~~l~~~~~d 1053 (1116)
T PRK09776 974 LENSPLPPRLLHLEITETALLNHAEAASRLVQKLRLAGCRVVLDDFGRGLSSFNYLKAFMADYLKIDGELCANLQGNLMD 1053 (1116)
T ss_pred HHHHCCCHHHEEEEECCCHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCCCCHHH
T ss_conf 98739486788999859713349999999999999789999998997867899999728999899898997175799548
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH
Q ss_conf 99999999999977980999703998999989980998994052068999899999
Q gi|254780468|r 896 IAILRSIIPMAKNIETTIIAKDIYGEIDIKELTRMGCDYIQDSHVASPLGFNSILK 951 (963)
Q Consensus 896 ~~~v~sii~~a~~lgi~viAegVE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~ 951 (963)
T Consensus 1054 ~~iV~~Ii~la~~Lgl~vVAEGVEt~~ql~~L~~lGcd~~QGY~fsrP~Plee~l~ 1109 (1116)
T PRK09776 1054 EMLVSIINGIAQRLGMKTIAGPVELPLTLDTLSGIGVDLAQGYVIGRPQPLDLLLN 1109 (1116)
T ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHC
T ss_conf 99999999999987898998688809999999977999887550064788999844