HHsearch alignment for GI: 254780468 and conserved domain: PRK10060
>PRK10060 RNase II stability modulator; Provisional.
Probab=100.00 E-value=0 Score=947.99 Aligned_cols=550 Identities=22% Similarity=0.343 Sum_probs=493.0
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHH-HH-HHHCCHHHHHHHHHHHHHHHCCC
Q ss_conf 99974888999998325938999987997899988899762899778338978-98-86269768999999999996078
Q gi|254780468|r 398 QGIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIR-NW-LPYIHINDRDNFRTILDSFVGYR 475 (963)
Q Consensus 398 ~~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~-~~-~~~ihp~D~~~~~~~l~~~~~~~ 475 (963)
T Consensus 104 ~~~~~~l~lAa~Vfe~a~egI~ItD~~~~I~~vN~af~~iTGy~~~eviG~n~~~l~~s~~~--~~~-~~~~~~~~l~-~ 179 (663)
T PRK10060 104 RDLSHGLSFAEQVVSEANSVIVILDSRGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRRE--AAA-SRRNIRGFFR-S 179 (663)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHCCCHHHHCCCCHHHHHCCCCC--CHH-HHHHHHHHHH-C
T ss_conf 99998879999998545864999979999887867977886899999189987998357554--488-9999999997-4
Q ss_pred CCEEEEEEEEECCCCCEEEEEEEEEEEECCCCC-EEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 973899999986999689998722676879998-8999999985305773123216630677532406699999999999
Q gi|254780468|r 476 RGRLQYEFRVRAADNQFHWMIIRIRPMSNSNGD-ILRYIGIANDITEQKKSLEGILCNAFQDNLTGIPNRQSFLDRLTTI 554 (963)
Q Consensus 476 ~~~~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~-~~~~~g~~~DIt~~~~~~~~l~~~a~~D~lTGL~NR~~f~~~l~~~ 554 (963)
T Consensus 180 ~~~w~gE~w~r~k~G~~~~~~~~-~~v~~~~~~~~~~~i~~f~DITe~k~~ee~l~~lA~~D~LTgLPNR~~~~~rL~~a 258 (663)
T PRK10060 180 GNAYEVERWIKTRKGQRLFLFRN-KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAIQELIDHA 258 (663)
T ss_pred CCCEEEEEEEEECCCCEEEEEEE-EEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98189888874058964579887-87760789706999998888048999999999873677423866289999999999
Q ss_pred HHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCHHHHHHHH
Q ss_conf 98755338984899999767857988842778899999999999998348997699980641020255669989999987
Q gi|254780468|r 555 LDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSLTRRIGELLKFPDILARLSGNRFGIILISENNSLKIADFA 634 (963)
Q Consensus 555 l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~ia~~L~~~~~~~~~laR~~gdeFaill~~~~~~~~~~~~~ 634 (963)
T Consensus 259 i~~~--~-~~~~AvlfiDLD~FK~INDt~GH~~GD~lL~~vA~RL~~~lr~~d~vARlGGDEFvvLl~~~-~~~~~~~~a 334 (663)
T PRK10060 259 IAQA--D-NNQVGIVYLDLDNFKKVNDAYGHMFGDQLLQDVSLAILSCLEEDQTLARLGGDEFLVLASHT-SQAALEAMA 334 (663)
T ss_pred HHHC--C-CCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCC-CHHHHHHHH
T ss_conf 9717--6-99389999978676834466270889999999999999768998899854897899997789-989999999
Q ss_pred HHHHHHHHCEEEECCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC--HHHHHHHHHHH
Q ss_conf 6555431011552546799999987764589889989999999999999987089740520111110--68999999987
Q gi|254780468|r 635 IAMRKSIAMPINLLEREITVTASIGFASWTSSKITSSEMLKNAELAMYHAKHRGGNHVESFRVSSFR--SDRVMIKEDLC 712 (963)
Q Consensus 635 ~~~~~~~~~~~~~~~~~i~~t~siGi~~~~~~~~~~~~ll~~Ad~Al~~Ak~~g~~~~~~~~~~~~~--~~~~~~~~~l~ 712 (963)
T Consensus 335 ~ril~~l~~P~~i~~~~v~vsaSIGIa~~p~~~~~~~~Ll~~AD~Amy~AK~~Grn~~~~f~~~m~~~~~~~~~le~~Lr 414 (663)
T PRK10060 335 SRILTRLRLPFRIGLIEVYTGCSIGIALSPEHGDDSESLIRSADTAMYTAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLR 414 (663)
T ss_pred HHHHHHHCCCEEECCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHH
T ss_conf 99999850687999999999889999980799999999999999999999970899816628899999999999999999
Q ss_pred HHHHHCCHHHHHCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 43641003554114688221442100000000357755302303578889779967998999999999999988715899
Q gi|254780468|r 713 LAVENSELYLVYHPIIRLMDEEIVGLEALIQWDHPKWGNISSSEFMLIAEELCMIKAINLFMLERIARDIISWRDQANMP 792 (963)
Q Consensus 713 ~al~~~~~~l~~QPi~~~~~~~~~~~E~l~R~~~~~~~~i~p~~fi~~ae~~gl~~~ld~~vl~~a~~~l~~~~~~~~~~ 792 (963)
T Consensus 415 ~Al~~~ef~l~YQPivdl-~g~i~G~EALlRW~hp~~G~I~P~~FIp~AE~~GLi~~Lg~wVl~~A~~q~~~w~~~g~-- 491 (663)
T PRK10060 415 KALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVVRQAAKWRDKGI-- 491 (663)
T ss_pred HHHHCCCEEEEEEEEECC-CCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_conf 999769879998647728-99889999999887799992898999999987797899999999999999999986699--
Q ss_pred CEEEEEECCHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
Q ss_conf 84999976977943914899999999881999546999971337750999899999999988989999188776454888
Q gi|254780468|r 793 PIFILINIASKDLLDNELCEGMQALISKTLYSPSRIKLSFSESVVMGNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSY 872 (963)
Q Consensus 793 ~~~vsINlS~~~l~~~~f~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~ 872 (963)
T Consensus 492 ~~~vsVNlS~~ql~~~~f~~~l~~~L~~~~l~p~~L~lEITEs~l~~d~~~~~~~l~~Lr~lGv~iALDDFGTGySSLsy 571 (663)
T PRK10060 492 NLRVAVNVSARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENEELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 (663)
T ss_pred CCEEEEEECHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
T ss_conf 86489991789948835999999999982998246999981861223999999999999978998999899997336999
Q ss_pred HHHCCCCEEEEEHHHHCCC--CHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHH
Q ss_conf 9727998999716885399--94579999999999997798099970399899998998099899405206899989999
Q gi|254780468|r 873 LGYIPFDTVKFNGSLMTGS--TEKRIAILRSIIPMAKNIETTIIAKDIYGEIDIKELTRMGCDYIQDSHVASPLGFNSIL 950 (963)
Q Consensus 873 L~~l~~d~iKiD~sfv~~~--~~~~~~~v~sii~~a~~lgi~viAegVE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~ 950 (963)
T Consensus 572 L~~lPvd~lKIDrsFV~~i~~d~~~~aIV~aIi~LA~~Lgl~vVAEGVEt~eQ~~~L~~lGcd~~QGy~fsrPmPa~ef~ 651 (663)
T PRK10060 572 LARFPIDAIKLDQSFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVETAKEDAFLTKNGVNERQGFLFAKPMPAVAFE 651 (663)
T ss_pred HHHCCCCEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHH
T ss_conf 84289998999989971604892279999999999998699899913864999999997599998267536089999999
Q ss_pred HHHHHHCCC
Q ss_conf 999851611
Q gi|254780468|r 951 KLLKERFPL 959 (963)
Q Consensus 951 ~~l~~~~~~ 959 (963)
T Consensus 652 ~wL~~~q~~ 660 (663)
T PRK10060 652 RWYKRYQKL 660 (663)
T ss_pred HHHHHHHHH
T ss_conf 999974420