HHsearch alignment for GI: 254780468 and conserved domain: PRK10610
>PRK10610 chemotaxis regulatory protein CheY; Provisional.
Probab=91.08 E-value=1 Score=23.06 Aligned_cols=109 Identities=13% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCC-EEEEEE
Q ss_conf 0999899999999988989999188776454888972799899971688539994579999999999997798-099970
Q gi|254780468|r 839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIET-TIIAKD 917 (963)
Q Consensus 839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi-~viAeg 917 (963)
T Consensus 13 D~~~~r~~l~~~L~~~g~~-~v~~a~~g~~al~~~~~~~~Dlil~D~~M-P~--~dG~el~~~ir~~~~~~~~Pii~~T~ 88 (129)
T PRK10610 13 DFSTMRRIVRNLLKELGFN-NVEEAEDGVDALNKLQAGGFGFVISDWNM-PN--MDGLELLKTIRADGAMSALPVLMVTA 88 (129)
T ss_pred CCHHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHCCCCEEEEECCC-CC--CCHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 9899999999999986997-89998999999999985899999981899-99--98999999998577778996899988
Q ss_pred CCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 39989999899809989940520689998999999985
Q gi|254780468|r 918 IYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKE 955 (963)
Q Consensus 918 VE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~ 955 (963)
T Consensus 89 ~~~~~~~~~a~~~Ga~~----yl~KP~~~~~L~~~i~~ 122 (129)
T PRK10610 89 EAKKENIIAAAQAGASG----YVVKPFTAATLEEKLNK 122 (129)
T ss_pred CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHHHH
T ss_conf 68999999999869988----99898999999999999