HHsearch alignment for GI: 254780468 and conserved domain: PRK10820
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=97.74 E-value=0.006 Score=41.06 Aligned_cols=107 Identities=9% Similarity=0.086 Sum_probs=67.8
Q ss_pred HHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHH-HHHHHCCHHHHHHHHHHHHHHHCCCCCE-EEEEE
Q ss_conf 999998325938999987997899988899762899778338978-9886269768999999999996078973-89999
Q gi|254780468|r 406 RQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIR-NWLPYIHINDRDNFRTILDSFVGYRRGR-LQYEF 483 (963)
Q Consensus 406 r~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~-~~~~~ihp~D~~~~~~~l~~~~~~~~~~-~~~e~ 483 (963)
T Consensus 81 ~L~alLdsl~dgV~svD~~G~I~~~N~aa~~i~~~~~~~~~G~~i~~~~~~~~------~~----~~l~~~~~~~~~~~~ 150 (513)
T PRK10820 81 ALSALLEALPEPVLSIDMKSKVELANPASCQLFGQSEERLRNHTAAQLINGFN------FL----RWLESEPQDSHNEHV 150 (513)
T ss_pred HHHHHHHHCCCCEEEECCCCCEEEEHHHHHHHHCCCHHHHCCCCHHHHCCCCC------HH----HHHHCCCCCCCCEEE
T ss_conf 99999973899789985998199763999998498968877979999718756------99----998628987663599
Q ss_pred EEECCCCCEEEEEEEEEEEECCCCC--EEEEEEEEEECHHHHHH
Q ss_conf 9986999689998722676879998--89999999853057731
Q gi|254780468|r 484 RVRAADNQFHWMIIRIRPMSNSNGD--ILRYIGIANDITEQKKS 525 (963)
Q Consensus 484 r~r~~dG~~~w~~~~~~~i~~~~g~--~~~~~g~~~DIt~~~~~ 525 (963)
T Consensus 151 ~~---~~~~~~~~~~pi~~~~~~~~~~~~GaV~~lk~~~~~~~~ 191 (513)
T PRK10820 151 VI---NGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGRQ 191 (513)
T ss_pred EE---CCCEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHH
T ss_conf 87---696789997678752778860366689882468999999