HHsearch alignment for GI: 254780468 and conserved domain: PRK10820

>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=97.74  E-value=0.006  Score=41.06  Aligned_cols=107  Identities=9%  Similarity=0.086  Sum_probs=67.8

Q ss_pred             HHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHH-HHHHHCCHHHHHHHHHHHHHHHCCCCCE-EEEEE
Q ss_conf             999998325938999987997899988899762899778338978-9886269768999999999996078973-89999
Q gi|254780468|r  406 RQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIR-NWLPYIHINDRDNFRTILDSFVGYRRGR-LQYEF  483 (963)
Q Consensus       406 r~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~-~~~~~ihp~D~~~~~~~l~~~~~~~~~~-~~~e~  483 (963)
T Consensus        81 ~L~alLdsl~dgV~svD~~G~I~~~N~aa~~i~~~~~~~~~G~~i~~~~~~~~------~~----~~l~~~~~~~~~~~~  150 (513)
T PRK10820         81 ALSALLEALPEPVLSIDMKSKVELANPASCQLFGQSEERLRNHTAAQLINGFN------FL----RWLESEPQDSHNEHV  150 (513)
T ss_pred             HHHHHHHHCCCCEEEECCCCCEEEEHHHHHHHHCCCHHHHCCCCHHHHCCCCC------HH----HHHHCCCCCCCCEEE
T ss_conf             99999973899789985998199763999998498968877979999718756------99----998628987663599


Q ss_pred             EEECCCCCEEEEEEEEEEEECCCCC--EEEEEEEEEECHHHHHH
Q ss_conf             9986999689998722676879998--89999999853057731
Q gi|254780468|r  484 RVRAADNQFHWMIIRIRPMSNSNGD--ILRYIGIANDITEQKKS  525 (963)
Q Consensus       484 r~r~~dG~~~w~~~~~~~i~~~~g~--~~~~~g~~~DIt~~~~~  525 (963)
T Consensus       151 ~~---~~~~~~~~~~pi~~~~~~~~~~~~GaV~~lk~~~~~~~~  191 (513)
T PRK10820        151 VI---NGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGRQ  191 (513)
T ss_pred             EE---CCCEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHH
T ss_conf             87---696789997678752778860366689882468999999