HHsearch alignment for GI: 254780468 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=94.82 E-value=0.32 Score=27.20 Aligned_cols=113 Identities=15% Similarity=0.180 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 09998999999999889899991887764548889727998999716885399945799999999999977980999703
Q gi|254780468|r 839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTIIAKDI 918 (963)
Q Consensus 839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~viAegV 918 (963)
T Consensus 832 DNpINq~VL~~~L~~LG~~V~~--A~NG~EALe~l~~~~fDLILMDIqM-PvMDG--yEaTr~IRe~~--~~iPIIALTA 904 (947)
T PRK10841 832 DHPINRRLLADQLGSLGYQCKT--ANDGVDALNVLSKNHIDIVLSDVNM-PNMDG--YRLTQRIRQLG--LTLPVIGVTA 904 (947)
T ss_pred CCHHHHHHHHHHHHHCCCEEEE--ECCHHHHHHHHHCCCCCEEEECCCC-CCCCH--HHHHHHHHCCC--CCCEEEEEEC
T ss_conf 7899999999999976999999--8999999999756998989970888-99809--99999998089--8494999938
Q ss_pred C-CHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 9-9899998998099899405206899989999999851611026
Q gi|254780468|r 919 Y-GEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKERFPLVKN 962 (963)
Q Consensus 919 E-~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~~~~~~~~ 962 (963)
T Consensus 905 nA~~edkerCleAGMDd----yLsKPV~l~~L~~vL~~Y~~~~r~ 945 (947)
T PRK10841 905 NALAEEKQRCLEAGMDS----CLSKPVTLDVLKQTLTVYAERVRK 945 (947)
T ss_pred CCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99989999999879999----997989799999999999877643