HHsearch alignment for GI: 254780468 and conserved domain: PRK11073

>PRK11073 glnL nitrogen regulation protein NR(II); Provisional.
Probab=98.29  E-value=3.4e-05  Score=59.16  Aligned_cols=115  Identities=10%  Similarity=0.074  Sum_probs=79.0

Q ss_pred             HHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
Q ss_conf             99998325938999987997899988899762899778338978988626976899999999999607897389999998
Q gi|254780468|r  407 QSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVR  486 (963)
Q Consensus       407 ~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r~r  486 (963)
T Consensus         9 ~~~Il~~~~d~Iiv~D~~g~I~~~N~aa~~l~g~~~~~~~G~~~--~~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~   84 (348)
T PRK11073          9 AGQILNSLINSILLLDDNLAIHYANPAAQQLLAQSSRKLFGTPL--PELLSYFSLN-I-ELMQESLQAGQGFTDNEVTLV   84 (348)
T ss_pred             HHHHHHHHHHHHEEECCCCCEEEECHHHHHHHCCCHHHHCCCCH--HHHHCCCCCC-H-HHHHHHHHCCCCCCCCEEEEE
T ss_conf             99999866079649989797012839999997859899859968--9984665301-8-999999973897413239999


Q ss_pred             CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHH
Q ss_conf             699968999872267687999889999999853057731232166
Q gi|254780468|r  487 AADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILC  531 (963)
Q Consensus       487 ~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~  531 (963)
T Consensus        85 -~~~~~~~~~~~~~~~~~--~---~~l~~~~di~~~k~l~~e~~~  123 (348)
T PRK11073         85 -IDGRSHILSLTAQRLPE--G---MILLEMAPMDNQRRLSQEQLQ  123 (348)
T ss_pred             -ECCEEEEEEEEEEECCC--C---EEEEEEEECHHHHHHHHHHHH
T ss_conf             -89969999999998258--6---899999962799999999999