HHsearch alignment for GI: 254780468 and conserved domain: PRK11091

>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=99.67  E-value=1.3e-11  Score=110.76  Aligned_cols=134  Identities=13%  Similarity=0.100  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCC
Q ss_conf             88899974888999998325938999987997899988899762899778338978988626976899999999999607
Q gi|254780468|r  395 YFSQGIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGY  474 (963)
Q Consensus       395 ~~~~~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~  474 (963)
T Consensus       145 ~~q~~l~~~~~llRs~~D~~Pdli~~rd~~g~f~gCNrafe~~~G~~e~eliG~t~~--d~~~~e~a~~~~~~D~~v~~~  222 (779)
T PRK11091        145 ETQIELEQQSSLLRSFLDASPDLVYYRNEDGEFSGCNRAMELLTGKSEKQLVGLTPK--DVYSPEAAEKVIETDEKVFRH  222 (779)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHCCCCHH--HHCCHHHHHHHHHHHHHHHHC
T ss_conf             999999998899998850287515787798765341099998809998998499835--527998899999738999864


Q ss_pred             CCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHH
Q ss_conf             897389999998699968999872267687999889999999853057731232166
Q gi|254780468|r  475 RRGRLQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILC  531 (963)
Q Consensus       475 ~~~~~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~  531 (963)
T Consensus       223 -~~~~~~e~w~~~~dG~~~~~e~~k~P~~d~~g~~~G~~g~~rDITerk~aeeaLE~  278 (779)
T PRK11091        223 -NVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEK  278 (779)
T ss_pred             -CCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHH
T ss_conf             -79821113466489866789986401353899788786300160177899999999