HHsearch alignment for GI: 254780468 and conserved domain: PRK11360

>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=99.08  E-value=3.9e-07  Score=74.84  Aligned_cols=123  Identities=14%  Similarity=0.156  Sum_probs=94.5

Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             88999998325938999987997899988899762899778338978988626976899999999999607897389999
Q gi|254780468|r  404 GERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEF  483 (963)
Q Consensus       404 ~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~  483 (963)
T Consensus       260 ~~~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~llg~~~~e~ig~~~~--~l~~~~~---~~~~~~~~l~~~~~~~~~~~  334 (607)
T PRK11360        260 RTLNELIIENAADGIIAIDRQGDITTMNPAAEVITGYQRHELVGQPYS--MLFDNTQ---FYSPVLDTLEHGTEHVALEI  334 (607)
T ss_pred             HHHHHHHHHHHCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHH--HHCCCHH---HHHHHHHHHHCCCCCCCEEE
T ss_conf             998999986104669999799949998389999858797898596799--9579576---77999999853774212489


Q ss_pred             EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf             9986999689998722676879998899999998530577312321663
Q gi|254780468|r  484 RVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN  532 (963)
Q Consensus       484 r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~  532 (963)
T Consensus       335 ~~~~~~~-~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~le~~l~~~  382 (607)
T PRK11360        335 SFPGRDR-TIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRLQRRMARA  382 (607)
T ss_pred             EECCCCC-EEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHH
T ss_conf             9605883-49999998535768985889999999577899999999999