HHsearch alignment for GI: 254780468 and conserved domain: PRK11360
>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=99.08 E-value=3.9e-07 Score=74.84 Aligned_cols=123 Identities=14% Similarity=0.156 Sum_probs=94.5
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 88999998325938999987997899988899762899778338978988626976899999999999607897389999
Q gi|254780468|r 404 GERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEF 483 (963)
Q Consensus 404 ~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~ 483 (963)
T Consensus 260 ~~~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~llg~~~~e~ig~~~~--~l~~~~~---~~~~~~~~l~~~~~~~~~~~ 334 (607)
T PRK11360 260 RTLNELIIENAADGIIAIDRQGDITTMNPAAEVITGYQRHELVGQPYS--MLFDNTQ---FYSPVLDTLEHGTEHVALEI 334 (607)
T ss_pred HHHHHHHHHHHCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHH--HHCCCHH---HHHHHHHHHHCCCCCCCEEE
T ss_conf 998999986104669999799949998389999858797898596799--9579576---77999999853774212489
Q ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf 9986999689998722676879998899999998530577312321663
Q gi|254780468|r 484 RVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN 532 (963)
Q Consensus 484 r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~ 532 (963)
T Consensus 335 ~~~~~~~-~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~le~~l~~~ 382 (607)
T PRK11360 335 SFPGRDR-TIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRLQRRMARA 382 (607)
T ss_pred EECCCCC-EEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHH
T ss_conf 9605883-49999998535768985889999999577899999999999