HHsearch alignment for GI: 254780468 and conserved domain: pfam00563
>pfam00563 EAL EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.
Probab=100.00 E-value=3.2e-44 Score=373.58 Aligned_cols=231 Identities=34% Similarity=0.589 Sum_probs=214.2
Q ss_pred HHHHHHHCCHHHHHCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 8743641003554114688221442100000000357755302303578889779967998999999999999988715-
Q gi|254780468|r 711 LCLAVENSELYLVYHPIIRLMDEEIVGLEALIQWDHPKWGNISSSEFMLIAEELCMIKAINLFMLERIARDIISWRDQA- 789 (963)
Q Consensus 711 l~~al~~~~~~l~~QPi~~~~~~~~~~~E~l~R~~~~~~~~i~p~~fi~~ae~~gl~~~ld~~vl~~a~~~l~~~~~~~- 789 (963)
T Consensus 1 l~~al~~~~~~~~~QPI~~~~~~~i~g~E~l~R~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~~~~ 80 (233)
T pfam00563 1 LREALENGEFSLYFQPIVDLRTGKVIGYEALLRWQHPDGGLISPEEFLPLAERLGLIAELDRWVLEQALAQLAEWRENAL 80 (233)
T ss_pred CHHHHHCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 96799679999999765997999999999999668699988999999999987697999999999999999999998157
Q ss_pred CCCCEEEEEECCHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf 89984999976977943914899999999881999546999971337750999899999999988989999188776454
Q gi|254780468|r 790 NMPPIFILINIASKDLLDNELCEGMQALISKTLYSPSRIKLSFSESVVMGNPERSRLLLGRLRKIGISLTLDDFGTKCSL 869 (963)
Q Consensus 790 ~~~~~~vsINlS~~~l~~~~f~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~~l~~~G~~ialDdFG~g~ss 869 (963)
T Consensus 81 ~~~~~~l~iNl~~~~l~~~~~~~~l~~-~~~~~~~~~~l~~Ei~E~~~~~~-~~~~~~i~~lk~~G~~iaiDdfG~~~~~ 158 (233)
T pfam00563 81 LPPDLPLSVNLSPASLLDPSFLEALLA-LKQGGLPPSRLVLEITESALDED-LRLLEALARLRSLGFRLALDDFGTGYSS 158 (233)
T ss_pred CCCCCEEEEECCHHHCCCHHHHHHHHH-HHHHCCCHHHEEEEEECHHHCCC-HHHHHHHHHHHHCCCCEEECCCCCCCCC
T ss_conf 788807999739787338279999999-99759883567999734342281-9999999999977995896178999767
Q ss_pred HHHHHHCCCCEEEEEHHHHCCC-CHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCC
Q ss_conf 8889727998999716885399-9457999999999999779809997039989999899809989940520689
Q gi|254780468|r 870 LSYLGYIPFDTVKFNGSLMTGS-TEKRIAILRSIIPMAKNIETTIIAKDIYGEIDIKELTRMGCDYIQDSHVASP 943 (963)
Q Consensus 870 l~~L~~l~~d~iKiD~sfv~~~-~~~~~~~v~sii~~a~~lgi~viAegVE~~~~~~~l~~~G~d~~QG~~~~~P 943 (963)
T Consensus 159 ~~~l~~l~~d~iKid~~~~~~~~~~~~~~~~~~l~~~a~~~~~~viaeGVE~~~~~~~l~~~Gv~~~QG~~~~~P 233 (233)
T pfam00563 159 LSYLSRLPPDYIKIDRSFIKDLSDPESRALLRALIALARELGIKVVAEGVETEEQLELLKELGIDYVQGYLFSKP 233 (233)
T ss_pred HHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCC
T ss_conf 789974888789998999840777218999999999999879989997086399999999759998316810279