HHsearch results for GI: 254780468 and protein with PDBid: 1oj5_A

>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=98.44  E-value=3e-07  Score=73.93  Aligned_cols=103  Identities=10%  Similarity=0.035  Sum_probs=79.3

Q ss_pred             CEEEEEECCCCEEEECHHHHHHHC-CCHHHHCCCHHHHHHHCCHHHHH--HHHHHHHHHHCCCCCEEEEEEEEECCCCCE
Q ss_conf             389999879978999888997628-99778338978988626976899--999999999607897389999998699968
Q gi|254780468|r  416 DIVWDWDIVRDRVTTTPDIATILG-LASGSMHGPIRNWLPYIHINDRD--NFRTILDSFVGYRRGRLQYEFRVRAADNQF  492 (963)
Q Consensus       416 ~~i~~~d~~~~~~~~n~~~~~~lG-~~~~~l~~~~~~~~~~ihp~D~~--~~~~~l~~~~~~~~~~~~~e~r~r~~dG~~  492 (963)
                      +=+-.-|+++.+++++++....+| |.++++.|  .++.+++||+|++  ..+...+.+++. +.....+||++++||.|
T Consensus         8 ~F~trh~~~gki~~vd~~~~~~lg~y~peeLiG--~s~~~~~Hp~D~~~~~~~~~~~~~~~~-g~~~s~~YR~~~kdG~y   84 (132)
T 1oj5_A            8 SFMTKQDTTGKIISIDTSSLRAAGRTGWEDLVR--KCIYAFFQPQGREPSYARQLFQEVMTR-GTASSPSYRFILNDGTM   84 (132)
T ss_dssp             EEEEEECTTCCEEEEECHHHHTTCCSCHHHHHH--HHHHHHTSCBTTBCCHHHHHHHHHHHH-SEEECCCEEEECTTSCE
T ss_pred             EEEEEECCCCCEEEECCHHHHHHCCCCHHHHCC--CCHHHHCCCCCHHHHHHHHHHHHHHHC-CCCCCEEEEEEEECCCE
T ss_conf             279998689729998733535543779799848--878895086640899999999999866-98045357999609919


Q ss_pred             EEEEEEEEEEECCC-CCEEEEEEEEEECHH
Q ss_conf             99987226768799-988999999985305
Q gi|254780468|r  493 HWMIIRIRPMSNSN-GDILRYIGIANDITE  521 (963)
Q Consensus       493 ~w~~~~~~~i~~~~-g~~~~~~g~~~DIt~  521 (963)
                      +|++.+++.+++.. |++-.++++.+=+.+
T Consensus        85 vwvqT~~~~~~~~~~~~~~~Ii~~h~i~~~  114 (132)
T 1oj5_A           85 LSAHTRCKLCYPQSPDMQPFIMGIHIIDRE  114 (132)
T ss_dssp             EEEEEEEEEECC----CCCEEEEEEEEECC
T ss_pred             EEEEEEEEEECCCCCCCCCEEEEEEEECCC
T ss_conf             999999999648888988899999887357