HHsearch results for GI: 254780468 and protein with PDBid: 1v9y_A
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli K12} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.36 E-value=4.9e-12 Score=112.50 Aligned_cols=130 Identities=11% Similarity=0.016 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 99748889999983259389999879978999888997628997783389789886269768999999999996078973
Q gi|254780468|r 399 GIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGR 478 (963)
Q Consensus 399 ~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~ 478 (963)
+.....+++..+++++++|++.+|.++.++++||+++++|||+++++.|.. +..++++++++.....++.........
T Consensus 34 ~~~~~~~~~~~~le~~~~gii~~d~~g~I~~~N~a~~~l~Gy~~~elig~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ 111 (167)
T 1v9y_A 34 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN--IDMLIPRDLRPAHPEYIRHNREGGKAR 111 (167)
T ss_dssp ------CCHHHHHHTCSSEEEEECTTSBEEEECHHHHHHHSCCGGGTTTSB--GGGGSCGGGTTTHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHCCCHHHHCCCC--CCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 999889999999973640328991979889995899999893999980664--223576311677867999999723444
Q ss_pred ---EEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf ---899999986999689998722676879998899999998530577312321663
Q gi|254780468|r 479 ---LQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN 532 (963)
Q Consensus 479 ---~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~ 532 (963)
...+...+++||..+|++++..++.+.++ ..++++++|||++|+++++++++
T Consensus 112 ~~~~~~e~~~~~kdG~~~~v~~~~~~i~~~~~--~~~v~~i~DITe~k~~ee~l~~L 166 (167)
T 1v9y_A 112 VEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQKEQTRQL 166 (167)
T ss_dssp -----CEEEEECTTSCEEEEEEEEEEEEETTE--EEEEEEEEC--------------
T ss_pred CCCCCEEEEEEECCCCEEEEEEEEEEEEECCE--EEEEEEEEECHHHHHHHHHHHHH
T ss_conf 56520577776516854999999999997997--99999999977999999999714