HHsearch results for GI: 254780468 and protein with PDBid: 1v9y_A

>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli K12} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.36  E-value=4.9e-12  Score=112.50  Aligned_cols=130  Identities=11%  Similarity=0.016  Sum_probs=104.3

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             99748889999983259389999879978999888997628997783389789886269768999999999996078973
Q gi|254780468|r  399 GIFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGR  478 (963)
Q Consensus       399 ~l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~  478 (963)
                      +.....+++..+++++++|++.+|.++.++++||+++++|||+++++.|..  +..++++++++.....++.........
T Consensus        34 ~~~~~~~~~~~~le~~~~gii~~d~~g~I~~~N~a~~~l~Gy~~~elig~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~  111 (167)
T 1v9y_A           34 ADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNN--IDMLIPRDLRPAHPEYIRHNREGGKAR  111 (167)
T ss_dssp             ------CCHHHHHHTCSSEEEEECTTSBEEEECHHHHHHHSCCGGGTTTSB--GGGGSCGGGTTTHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHHCCCHHHHCCCC--CCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             999889999999973640328991979889995899999893999980664--223576311677867999999723444


Q ss_pred             ---EEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf             ---899999986999689998722676879998899999998530577312321663
Q gi|254780468|r  479 ---LQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN  532 (963)
Q Consensus       479 ---~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~  532 (963)
                         ...+...+++||..+|++++..++.+.++  ..++++++|||++|+++++++++
T Consensus       112 ~~~~~~e~~~~~kdG~~~~v~~~~~~i~~~~~--~~~v~~i~DITe~k~~ee~l~~L  166 (167)
T 1v9y_A          112 VEGMSRELQLEKKDGSKIWTRFALSKVSAEGK--VYYLALVRDASVEMAQKEQTRQL  166 (167)
T ss_dssp             -----CEEEEECTTSCEEEEEEEEEEEEETTE--EEEEEEEEC--------------
T ss_pred             CCCCCEEEEEEECCCCEEEEEEEEEEEEECCE--EEEEEEEEECHHHHHHHHHHHHH
T ss_conf             56520577776516854999999999997997--99999999977999999999714