HHsearch results for GI: 254780468 and protein with PDBid: 1w25_A
>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=100.00 E-value=2.4e-36 Score=308.39 Aligned_cols=179 Identities=27% Similarity=0.386 Sum_probs=159.4
Q ss_pred EEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHH
Q ss_conf 98530577312321663067753240669999999999998755338984899999767857988842778899999999
Q gi|254780468|r 516 ANDITEQKKSLEGILCNAFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSL 595 (963)
Q Consensus 516 ~~DIt~~~~~~~~l~~~a~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~i 595 (963)
..++++.|+.+++++++|+||+|||||||++|.++++.+++++++.+ .+.+|+++|||+||.|||+|||.+||++|+++
T Consensus 271 ~~~~~~~~~~~~~l~~la~~D~LTgL~NR~~~~~~l~~~i~~a~r~~-~~~al~~lDlD~FK~iND~~GH~~GD~vL~~v 349 (459)
T 1w25_A 271 KRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGG-DPVSALLIDIDFFKKINDTFGHDIGDEVLREF 349 (459)
T ss_dssp HHHHHHHHSSSSCCSTTCCBCTTTCCBCHHHHHHHHHHHHHHHHTSS-CCCEEEEEEETTHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CEEEEEEECCCHHCCHHHCCCCHHHHHHHHHH
T ss_conf 77778999999876641276865687129999998899999987429-87999996043014021134826789999999
Q ss_pred HHHHHHHCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHH-HCEEEEC--CEEEEEEEEEEEEECCCCCCCHHH
Q ss_conf 9999983489976999806410202556699899999876555431-0115525--467999999877645898899899
Q gi|254780468|r 596 TRRIGELLKFPDILARLSGNRFGIILISENNSLKIADFAIAMRKSI-AMPINLL--EREITVTASIGFASWTSSKITSSE 672 (963)
Q Consensus 596 a~~L~~~~~~~~~laR~~gdeFaill~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~i~~t~siGi~~~~~~~~~~~~ 672 (963)
|++|++.++++|.+||+|||||++++++.+ .+.+..++++++..+ ..|+... +..+.+|+|||++.+|.++.++++
T Consensus 350 a~~L~~~~r~~d~vaR~GGDEF~ill~~~~-~~~a~~~a~ri~~~i~~~~f~~~~~~~~~~vt~SiGia~~~~~~~~~~~ 428 (459)
T 1w25_A 350 ALRLASNVRAIDLPCRYGGEEFVVIMPDTA-LADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEA 428 (459)
T ss_dssp HHHHHHTSCTTSEEEECSSSEEEEEETTCC-HHHHHHHHHHHHHHHHTSCEECGGGSCEECCCEEEEEEECCSTTCCHHH
T ss_pred HHHHHHHCCCCCEEEEECCCEEEEEECCCC-HHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEECCCCCCHHH
T ss_conf 999997289886899985767999978999-9999999999999996689366589889999999999971799998999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 999999999999870897405201
Q gi|254780468|r 673 MLKNAELAMYHAKHRGGNHVESFR 696 (963)
Q Consensus 673 ll~~Ad~Al~~Ak~~g~~~~~~~~ 696 (963)
++++||.|||+||++|+|++....
T Consensus 429 Ll~~AD~Amy~AK~~Grnrvv~~~ 452 (459)
T 1w25_A 429 LLKRADEGVYQAKASGRNAVVGKA 452 (459)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEECC
T ss_pred HHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 999999999999971999599800