HHsearch results for GI: 254780468 and protein with PDBid: 1w25_A

>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=100.00  E-value=2.4e-36  Score=308.39  Aligned_cols=179  Identities=27%  Similarity=0.386  Sum_probs=159.4

Q ss_pred             EEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHH
Q ss_conf             98530577312321663067753240669999999999998755338984899999767857988842778899999999
Q gi|254780468|r  516 ANDITEQKKSLEGILCNAFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSL  595 (963)
Q Consensus       516 ~~DIt~~~~~~~~l~~~a~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~i  595 (963)
                      ..++++.|+.+++++++|+||+|||||||++|.++++.+++++++.+ .+.+|+++|||+||.|||+|||.+||++|+++
T Consensus       271 ~~~~~~~~~~~~~l~~la~~D~LTgL~NR~~~~~~l~~~i~~a~r~~-~~~al~~lDlD~FK~iND~~GH~~GD~vL~~v  349 (459)
T 1w25_A          271 KRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGG-DPVSALLIDIDFFKKINDTFGHDIGDEVLREF  349 (459)
T ss_dssp             HHHHHHHHSSSSCCSTTCCBCTTTCCBCHHHHHHHHHHHHHHHHTSS-CCCEEEEEEETTHHHHHHHSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CEEEEEEECCCHHCCHHHCCCCHHHHHHHHHH
T ss_conf             77778999999876641276865687129999998899999987429-87999996043014021134826789999999


Q ss_pred             HHHHHHHCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHH-HCEEEEC--CEEEEEEEEEEEEECCCCCCCHHH
Q ss_conf             9999983489976999806410202556699899999876555431-0115525--467999999877645898899899
Q gi|254780468|r  596 TRRIGELLKFPDILARLSGNRFGIILISENNSLKIADFAIAMRKSI-AMPINLL--EREITVTASIGFASWTSSKITSSE  672 (963)
Q Consensus       596 a~~L~~~~~~~~~laR~~gdeFaill~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~i~~t~siGi~~~~~~~~~~~~  672 (963)
                      |++|++.++++|.+||+|||||++++++.+ .+.+..++++++..+ ..|+...  +..+.+|+|||++.+|.++.++++
T Consensus       350 a~~L~~~~r~~d~vaR~GGDEF~ill~~~~-~~~a~~~a~ri~~~i~~~~f~~~~~~~~~~vt~SiGia~~~~~~~~~~~  428 (459)
T 1w25_A          350 ALRLASNVRAIDLPCRYGGEEFVVIMPDTA-LADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEA  428 (459)
T ss_dssp             HHHHHHTSCTTSEEEECSSSEEEEEETTCC-HHHHHHHHHHHHHHHHTSCEECGGGSCEECCCEEEEEEECCSTTCCHHH
T ss_pred             HHHHHHHCCCCCEEEEECCCEEEEEECCCC-HHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEECCCCCCHHH
T ss_conf             999997289886899985767999978999-9999999999999996689366589889999999999971799998999


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEECC
Q ss_conf             999999999999870897405201
Q gi|254780468|r  673 MLKNAELAMYHAKHRGGNHVESFR  696 (963)
Q Consensus       673 ll~~Ad~Al~~Ak~~g~~~~~~~~  696 (963)
                      ++++||.|||+||++|+|++....
T Consensus       429 Ll~~AD~Amy~AK~~Grnrvv~~~  452 (459)
T 1w25_A          429 LLKRADEGVYQAKASGRNAVVGKA  452 (459)
T ss_dssp             HHHHHHHHHHHHHHTTSSCEEECC
T ss_pred             HHHHHHHHHHHHHHHCCCEEEECC
T ss_conf             999999999999971999599800