HHsearch results for GI: 254780468 and protein with PDBid: 2bas_A
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=100.00 E-value=6.4e-44 Score=369.41 Aligned_cols=236 Identities=17% Similarity=0.187 Sum_probs=211.3
Q ss_pred HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999874364100355411468822144210000000035775530230357888977996799899999999999998
Q gi|254780468|r 706 MIKEDLCLAVENSELYLVYHPIIRLMDEEIVGLEALIQWDHPKWGNISSSEFMLIAEELCMIKAINLFMLERIARDIISW 785 (963)
Q Consensus 706 ~~~~~l~~al~~~~~~l~~QPi~~~~~~~~~~~E~l~R~~~~~~~~i~p~~fi~~ae~~gl~~~ld~~vl~~a~~~l~~~ 785 (963)
.+.+.|...++.+++.++||||++++++++.|||+|+||.+++++..+|..|++.+++.++..++|+|+++++++.+.++
T Consensus 24 ~~~d~l~~~~~~d~ivp~fQPIvsl~~~~vvGyEaL~R~~~~~~~~~~~~~fl~~~~~~~~~~~ld~~vl~~al~~~~~~ 103 (431)
T 2bas_A 24 AMLDPLDILTNIDDVLPYYQAIFSAEEQKVVGYEVLGRILADSEIQSLGPFFLDAGIPEEYKLEVDNRIIRQALDRFLEA 103 (431)
T ss_dssp --CCHHHHHHTTTTEEEEEEEEEESSSSSEEEEEEEEEEEETTEEEESHHHHSCSSSCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCEEEEEECCEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 99999998744893999977038999999999998986567998876958889999883979999999999999999855
Q ss_pred HHHCCCCCEEEEEECCHHHHCCC--HHHHHHHHHHHHCCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 87158998499997697794391--4899999999881999546999971337750999899999999988989999188
Q gi|254780468|r 786 RDQANMPPIFILINIASKDLLDN--ELCEGMQALISKTLYSPSRIKLSFSESVVMGNPERSRLLLGRLRKIGISLTLDDF 863 (963)
Q Consensus 786 ~~~~~~~~~~vsINlS~~~l~~~--~f~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~~l~~~G~~ialDdF 863 (963)
..+.+++||+|+..+... +....+.+.+++.+++|++++|||+|+....+.+.+.++++.+|+.||+||||||
T Consensus 104 -----~~~~~L~iNis~~~l~~~~~~~~~~ll~~l~~~gl~~~rIvlEI~E~~~~~d~~~l~~~l~~lr~~G~~IALDDf 178 (431)
T 2bas_A 104 -----DSDLLIFMNQDANLLMLDHGESFLELLKEYEAKGIELHRFVLEITEHNFEGDIEQLYHMLAYYRTYGIKIAVDNI 178 (431)
T ss_dssp -----CTTCEEEEECCHHHHGGGTTHHHHHHHHHHHHTTCCGGGEEEEECCTTCCSCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred -----CCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECHHHHCCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf -----999659999689997322458999999889886979789689801213321699999999886457858999899
Q ss_pred CCCHHHHHHHHHCCCCEEEEEHHHHCCC--CHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCC
Q ss_conf 7764548889727998999716885399--94579999999999997798099970399899998998099899405206
Q gi|254780468|r 864 GTKCSLLSYLGYIPFDTVKFNGSLMTGS--TEKRIAILRSIIPMAKNIETTIIAKDIYGEIDIKELTRMGCDYIQDSHVA 941 (963)
Q Consensus 864 G~g~ssl~~L~~l~~d~iKiD~sfv~~~--~~~~~~~v~sii~~a~~lgi~viAegVE~~~~~~~l~~~G~d~~QG~~~~ 941 (963)
|+|+||+.++..++||+||||+++++++ ++..+.++++++.+||++|+.||||||||++++..++++||||+|||||+
T Consensus 179 G~g~s~l~~l~~l~pD~IKlD~sli~~~~~~~~~~~il~~Lv~la~~~g~~vIaEGVEt~~ql~~l~~lGvd~~QG~yf~ 258 (431)
T 2bas_A 179 GKESSNLDRIALLSPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGRYFQGYYLV 258 (431)
T ss_dssp TTTBCCHHHHHHHCCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHTTEEEECSTTTC
T ss_pred CCCCCHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCC
T ss_conf 99841399998589999999989985240496689999999999998699899981895999999997599896458412
Q ss_pred CCCCH
Q ss_conf 89998
Q gi|254780468|r 942 SPLGF 946 (963)
Q Consensus 942 ~P~~~ 946 (963)
+|.|.
T Consensus 259 ~P~~~ 263 (431)
T 2bas_A 259 SPSET 263 (431)
T ss_dssp CCBSS
T ss_pred CCCCC
T ss_conf 17985