HHsearch results for GI: 254780468 and protein with PDBid: 2gj3_A

>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.46  E-value=2.8e-12  Score=114.47  Aligned_cols=115  Identities=16%  Similarity=0.144  Sum_probs=98.0

Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHH-HHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             889999983259389999879978999888997628997783389789886269768-9999999999960789738999
Q gi|254780468|r  404 GERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHIND-RDNFRTILDSFVGYRRGRLQYE  482 (963)
Q Consensus       404 ~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D-~~~~~~~l~~~~~~~~~~~~~e  482 (963)
                      .|+++.+++++++++|.+|.+|.++++||++++++||+++++.|..  +..+.||++ ++.+....+.+.+  +..++.|
T Consensus         4 ~~~~~~~~e~~~~~i~~~D~~g~i~~vN~a~~~~~G~~~eel~g~~--~~~l~~~~~~~~~~~~~~~~l~~--~~~~~~e   79 (120)
T 2gj3_A            4 PEIFRQTVEHAPIAISITDLKANILYANRAFRTITGYGSEEVLGKN--ESILSNGTTPRLVYQALWGRLAQ--KKPWSGV   79 (120)
T ss_dssp             HHHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHHCCCTTGGGGCB--GGGGCCTTSCHHHHHHHHHHHHT--TCCEEEE
T ss_pred             HHHHHHHHHCCCHHEEEECCCCCEEEECHHHHHHHCCCHHHHCCCC--CCCCEECCCCHHHHHHHHHHHCC--CCCCEEE
T ss_conf             9999999971251539996999999996899998787956606754--00020024524555566544205--8863578


Q ss_pred             EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHH
Q ss_conf             9998699968999872267687999889999999853057
Q gi|254780468|r  483 FRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQ  522 (963)
Q Consensus       483 ~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~  522 (963)
                      ++.+++||+.+|+.++..|+++++|++.+++|+.+||||.
T Consensus        80 ~~~~~~dG~~~~~~~~~~pi~d~~G~~~~~~~v~~DITe~  119 (120)
T 2gj3_A           80 LVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSEL  119 (120)
T ss_dssp             EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSC
T ss_pred             EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCC
T ss_conf             8778489989999999999999998999999999835687