HHsearch results for GI: 254780468 and protein with PDBid: 2gj3_A
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.46 E-value=2.8e-12 Score=114.47 Aligned_cols=115 Identities=16% Similarity=0.144 Sum_probs=98.0
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHH-HHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 889999983259389999879978999888997628997783389789886269768-9999999999960789738999
Q gi|254780468|r 404 GERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHIND-RDNFRTILDSFVGYRRGRLQYE 482 (963)
Q Consensus 404 ~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D-~~~~~~~l~~~~~~~~~~~~~e 482 (963)
.|+++.+++++++++|.+|.+|.++++||++++++||+++++.|.. +..+.||++ ++.+....+.+.+ +..++.|
T Consensus 4 ~~~~~~~~e~~~~~i~~~D~~g~i~~vN~a~~~~~G~~~eel~g~~--~~~l~~~~~~~~~~~~~~~~l~~--~~~~~~e 79 (120)
T 2gj3_A 4 PEIFRQTVEHAPIAISITDLKANILYANRAFRTITGYGSEEVLGKN--ESILSNGTTPRLVYQALWGRLAQ--KKPWSGV 79 (120)
T ss_dssp HHHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHHCCCTTGGGGCB--GGGGCCTTSCHHHHHHHHHHHHT--TCCEEEE
T ss_pred HHHHHHHHHCCCHHEEEECCCCCEEEECHHHHHHHCCCHHHHCCCC--CCCCEECCCCHHHHHHHHHHHCC--CCCCEEE
T ss_conf 9999999971251539996999999996899998787956606754--00020024524555566544205--8863578
Q ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHH
Q ss_conf 9998699968999872267687999889999999853057
Q gi|254780468|r 483 FRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQ 522 (963)
Q Consensus 483 ~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~ 522 (963)
++.+++||+.+|+.++..|+++++|++.+++|+.+||||.
T Consensus 80 ~~~~~~dG~~~~~~~~~~pi~d~~G~~~~~~~v~~DITe~ 119 (120)
T 2gj3_A 80 LVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSEL 119 (120)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSC
T ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCC
T ss_conf 8778489989999999999999998999999999835687