HHsearch results for GI: 254780468 and protein with PDBid: 2gkg_A
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=95.48 E-value=0.069 Score=30.77 Aligned_cols=111 Identities=13% Similarity=0.062 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 09998999999999889899991887764548889727998999716885399945799999999999977980999703
Q gi|254780468|r 839 GNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTIIAKDI 918 (963)
Q Consensus 839 ~~~~~~~~~~~~l~~~G~~ialDdFG~g~ssl~~L~~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~viAegV 918 (963)
+|......+.+.|++.|+++- -+.+|-..+..+.+-++|.|=+|-.+-.+. +.-.+++.+-+-...-++.+|+-+-
T Consensus 13 Dd~~~~~~l~~~L~~~g~~v~--~a~~~~~al~~l~~~~pdliilD~~lp~~~--~G~~l~~~ir~~~~~~~iPii~lt~ 88 (127)
T 2gkg_A 13 SDTALSATLRSALEGRGFTVD--ETTDGKGSVEQIRRDRPDLVVLAVDLSAGQ--NGYLICGKLKKDDDLKNVPIVIIGN 88 (127)
T ss_dssp SCHHHHHHHHHHHHHHTCEEE--EECCHHHHHHHHHHHCCSEEEEESBCGGGC--BHHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHHCCCCEEEEECCCCCCC--CHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 999999999999998799999--989999999999847999999975777688--8999999998388889983899968
Q ss_pred CCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHC
Q ss_conf 998999989980998994052068999899999998516
Q gi|254780468|r 919 YGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKERF 957 (963)
Q Consensus 919 E~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~~~ 957 (963)
.+..+.....+.|++ .|+.||...+++...+++..
T Consensus 89 ~~~~~~~~a~~~Ga~----dyl~KP~~~~~L~~~i~~~L 123 (127)
T 2gkg_A 89 PDGFAQHRKLKAHAD----EYVAKPVDADQLVERAGALI 123 (127)
T ss_dssp GGGHHHHHHSTTCCS----EEEESSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCC----EEEECCCCHHHHHHHHHHHH
T ss_conf 985999999986998----99989899999999999987