HHsearch results for GI: 254780468 and protein with PDBid: 2ool_A
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliverdin, signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris CGA009} SCOP: d.110.2.1 d.110.3.9
Probab=96.96 E-value=0.0076 Score=38.50 Aligned_cols=146 Identities=9% Similarity=-0.012 Sum_probs=88.1
Q ss_pred EEEEEEC-CCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEE
Q ss_conf 8999987-997899988899762899778338978988626976899999999999607897389999998699968999
Q gi|254780468|r 417 IVWDWDI-VRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRLQYEFRVRAADNQFHWM 495 (963)
Q Consensus 417 ~i~~~d~-~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~~~e~r~r~~dG~~~w~ 495 (963)
.++..|. ++.++++|+++++++|++++++.|.. +.++++|++.++.+..+......... ..+++.++++|...|.
T Consensus 44 ~Llald~~d~~I~~vS~N~~~llG~~peellG~~--l~~ll~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~g~~~~~ 119 (337)
T 2ool_A 44 YLFVVSETDLRIASVSANVEDLLRQPPASLLNVP--IAHYLTAASAARLTHALHGGDPAAIN--PIRLDVVTPDGERAFN 119 (337)
T ss_dssp EEEEECTTTCBEEEEETTHHHHHSSCGGGGTTCB--GGGGBCHHHHHHHHHHHCC----CCC--SEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCEEEEECCCHHHHHCCCHHHHCCCC--HHHHCCHHHHHHHHHHHHCCCCCCCC--CEEEEEECCCCCCEEE
T ss_conf 7999988999799986749988494989983998--88968999999999876315845588--6899985377884567
Q ss_pred EEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 87226768799988999999985305773123216630677532406699999999999987553389848999997678
Q gi|254780468|r 496 IIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCNAFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDK 575 (963)
Q Consensus 496 ~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~a~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~ 575 (963)
...- ..+| .++..+.+.++.+..++. ...+...+.+..+
T Consensus 120 ~~~~----~~~~---~l~~ele~~~~~~~~~~~-------------------~~~l~~~~~~i~~--------------- 158 (337)
T 2ool_A 120 GILH----RHDS---IVILELEPRDESRYTNEF-------------------FRSVRVAIRRLQT--------------- 158 (337)
T ss_dssp EEEE----EETT---EEEEEEECCCCCSCHHHH-------------------HHHHHHHHHHHHT---------------
T ss_pred EEEE----ECCC---EEEEEEEECCCCCCHHHH-------------------HHHHHHHHHHHHH---------------
T ss_conf 9999----6498---058863444543125789-------------------9999999999984---------------
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHCCC-CCEEEEEECCC
Q ss_conf 579888427788999999999999983489-97699980641
Q gi|254780468|r 576 YKKINDVLGIAVGDDVLVSLTRRIGELLKF-PDILARLSGNR 616 (963)
Q Consensus 576 fk~iN~~~G~~~gD~lL~~ia~~L~~~~~~-~~~laR~~gde 616 (963)
...-+++++.+++.+++.+.- ...+||+..|.
T Consensus 159 ---------s~dl~~ll~~~v~~vr~l~~~dRv~iy~f~~d~ 191 (337)
T 2ool_A 159 ---------AADLPTACWIAASEVRRITGFDRIKVYQFAADW 191 (337)
T ss_dssp ---------CCSHHHHHHHHHHHHHHHHCCSEEEEEEECTTS
T ss_pred ---------HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf ---------238999999999999998467769999953888