HHsearch results for GI: 254780468 and protein with PDBid: 2qsj_A
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=90.59 E-value=0.69 Score=22.74 Aligned_cols=109 Identities=11% Similarity=0.059 Sum_probs=70.8
Q ss_pred CCHHHHHHHHHH-HHHCCCEEEEECCCCCHHHHHHHH-HCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEE-
Q ss_conf 099989999999-998898999918877645488897-27998999716885399945799999999999977980999-
Q gi|254780468|r 839 GNPERSRLLLGR-LRKIGISLTLDDFGTKCSLLSYLG-YIPFDTVKFNGSLMTGSTEKRIAILRSIIPMAKNIETTIIA- 915 (963)
Q Consensus 839 ~~~~~~~~~~~~-l~~~G~~ialDdFG~g~ssl~~L~-~l~~d~iKiD~sfv~~~~~~~~~~v~sii~~a~~lgi~viA- 915 (963)
+|....+..++. |.+.+....+....+|...+..+. +-++|.|=+|-.+- + .+.-.+++.+-.. .-++++|.
T Consensus 10 DD~~~~r~~l~~~L~~~~~~~~v~~a~~~~eal~~l~~~~~~DlvllD~~mP-~--~~G~e~l~~ir~~--~p~~~iivl 84 (154)
T 2qsj_A 10 DDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLP-D--AEAIDGLVRLKRF--DPSNAVALI 84 (154)
T ss_dssp CSCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC---------CHHHHHHHHHH--CTTSEEEEC
T ss_pred ECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCEEEECCCCC-C--CCHHHHHHHHHHH--CCCCCEEEE
T ss_conf 4999999999999972899849999668999999997459997899808889-9--8889999999987--889979999
Q ss_pred EECCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 70399899998998099899405206899989999999851
Q gi|254780468|r 916 KDIYGEIDIKELTRMGCDYIQDSHVASPLGFNSILKLLKER 956 (963)
Q Consensus 916 egVE~~~~~~~l~~~G~d~~QG~~~~~P~~~~~~~~~l~~~ 956 (963)
.+-++.+......+.|++ || +.||.+.+++..-++.-
T Consensus 85 T~~~~~~~~~~a~~~Ga~---gy-l~K~~~~~~L~~aI~~v 121 (154)
T 2qsj_A 85 SGETDHELIRAALEAGAD---GF-IPKSADPQVLIHAVSLI 121 (154)
T ss_dssp -----CHHHHHHHHTTCC---BB-CCTTSCHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHCCCC---EE-EECCCCHHHHHHHHHHH
T ss_conf 802899999999985998---89-97999999999999999